Rosa chinensis (China rose): 112172291
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Entry
112172291 CDS
T06020
Name
(RefSeq) nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112172291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112172291
Enzymes [BR:
rcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
112172291
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
112172291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
112172291
NCBI-ProteinID:
XP_040365069
LinkDB
All DBs
Position
6:complement(65301074..65306396)
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AA seq
751 aa
AA seq
DB search
MAASESRKNASSSSSETPQPPRSYGITKPIFLSGPSQSDRQRNIELEKFLVDSGLYESKD
EAAKREEVLGCIGQIVKDWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDT
LCVGPSYVNREEDFFIILHDILCEMEEVTELQRVPDAHVPVMKFKFQGISIDLLYASISL
LVVPEDLDISDESVLCNVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWGKRRG
VYSNVTGFLGGVNWAILVARICQLYPNANPSMLVSRFFRVYTQWRWPNPVLLCSIEENEL
GLPTWDPRKNPQDRFHHMPIITPAYPCMNSSYNVSVSTLRVMTEQFHHGNRICEEIELKK
SQWSALFEPYLFFEAYKNYLQVDIVAADADDLLAWKGWVESRLRQLTLKIERDTSGMLQC
HPYPKEYTDASKPCAHCAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRLDVNRYGFWKHGM
DMHVCHVRRKQLPPFVFPDGYKRSRLSRHISQQDEGTYEEPSGPIERHIRRRINPKIEDT
RPSELEKQTSISPLWMESVSPESIAGISGGTSNPSFSNGGRLECLPTGGNSGGQLESVKG
TMVPVGLVENVVRQSIAENESTAMCASEFPTVQKPSEEGKELVHPSAISFSESKETCQIE
INGDRVGNVVLVDRKNMETDSTGSVLNWTEGAIDVDQELVKPCSQTMGVENAEGVLKSTS
SNRNLNCEDDLLSSGAQFLRKSGTGNLHGVL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctgagagtcggaaaaatgcttcgtcttcttcgtctgagactccacagccg
ccgaggagttacggcatcacgaagccgatttttctctccgggccgtcgcagtctgatcgt
caacgaaatatcgaactcgagaagttcttggttgattcggggctgtatgagagcaaagac
gaggctgcgaaaagagaagaggttcttggctgcattggtcagattgtgaaagactgggtg
aagcaattgacacgccagagaggctacaccgatcagatggtggaggatgcaaatgctgtc
atttttacttttggatcgtatcggcttggggtccatgggcctggagctgatatagatact
ttgtgtgttggaccatcatatgtgaatcgagaggaggatttttttattattttgcatgac
atcctgtgtgaaatggaagaggtaactgaacttcaacgagttcctgatgctcatgtccca
gtcatgaaattcaagtttcagggcatatcaattgatcttctgtatgcaagcatatctctc
ttggttgtcccagaggatctggacatctcagatgaatctgtgctatgcaatgttgacgag
caaactgttcgaagtctgaatggttgcagggttgcagatcaaattcttaagcttgttcca
aatgttgagcacttccgcacaacactcaggtgtttgaagttttggggcaaaaggcgcggt
gtatattctaatgttactggatttcttggtggtgtaaattgggctattttagttgctcgg
atatgtcagctttatcccaatgcaaatcctagtatgttggtttctcggtttttcagagtg
tacactcagtggcgttggccaaatcctgtacttctttgttcaatagaagagaatgaactt
gggttacctacatgggatcctcgtaaaaaccctcaggatcgctttcatcatatgccgata
ataactcctgcatacccttgtatgaactctagttacaatgtctcagtaagtactctacgt
gttatgacagagcagttccaccatggtaataggatatgtgaggagattgagctgaagaaa
agccagtggagcgctctgtttgaaccttatcttttcttcgaggcatacaaaaactatctg
caggtggacattgtagcagccgatgctgatgatttgttggcgtggaaggggtgggtggaa
tctcggcttagacagctcaccttgaagatagagcgagacacaagtggaatgcttcagtgc
catccatatccaaaggagtatacagacgcatccaagccttgtgcgcattgtgctttcttt
atgggtttgcagaggaaagaaggagtaagaggtcaagaaggtcagcaatttgatatacgc
ggaacagtcgatgagttcaggcttgatgtaaacaggtatggattttggaaacatggcatg
gacatgcatgtttgtcatgttcgccggaagcagcttcctccctttgtcttccccgatggg
tataaacggtcgcgattatcaagacatataagccagcaagatgaaggaacttatgaagaa
ccctctgggcctattgaaagacatatcaggaggagaattaatcctaaaatagaggacacg
aggccgagtgaactagagaagcagacctctattagcccactatggatggagtctgtatcc
ccagaaagtattgcaggtatatctggtggaacatctaatcctagcttcagtaatggtggt
agattagagtgtctaccaactggaggcaattctggtggacaattggagagtgtaaagggt
accatggtacctgtggggttagttgaaaatgttgtgcggcaatccatcgctgaaaatgaa
tcaacagctatgtgtgcttctgaattccctacagtccagaagccttcagaagagggtaag
gagttggtacatccgtctgcaatatctttctcggaatccaaggaaacatgccagattgaa
ataaatggggacagagttggaaatgtggttttggtggacaggaagaatatggagactgac
tctactggtagtgtgctgaattggacagagggtgctattgatgttgaccaagaattagtc
aaaccatgcagtcagactatgggggtggagaatgctgaaggtgtattaaaatcaacttcc
agcaatcggaacctcaattgcgaggatgatttactttcatcaggagcacagttccttcgg
aaaagtggcactggaaatctgcacggcgtactataa
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