Rosa chinensis (China rose): 112172345
Help
Entry
112172345 CDS
T06020
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112172345
04121 Ubiquitin system [BR:
rcn04121
]
112172345
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
90S particles
Other 90S particles
112172345
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112172345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IP5PC_F
Beta-prop_Vps41
VID27
Motif
Other DBs
NCBI-GeneID:
112172345
NCBI-ProteinID:
XP_024165409
LinkDB
All DBs
Position
6:24682509..24689194
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEHTKERSQDLQRVFHNYDPAIRPQEKAVEYVRALNAAKLDKIFAKPFVG
AMDGHIDAISCMAKNMNHLVGIFSGSMDGDIRHWDIASRRTVHQFPGHQGAVRGLAVSTD
GRVLVSCGTDCSVRLWAVPISTAMELDVSSDKSVEPLETYVWKNAFRSVDHQWNFDRFAT
GGAGVDIWNHNRSAPEQSLEWGTDTVISVRFNPGQPDLLATSASDRSIALYDLRMGKPTA
KLIMATKTNSICWNPMEPFNFTAANEDCNCYSFDSRKLNAATCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK
AKASEQLGVLLPREKKRHEYHEAVKNRYKHLPEVKRIVRHRHLPKPIYKATGLRRTMIEA
ERRREEKRKAHSAPGSITSKPLRQRRIVRVEE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatatctcgatccacagatgaacataccaaggaacgaagccaagac
ctccagagggtgttccacaattacgaccccgccattcgaccccaagagaaggccgttgag
tatgttcgggctcttaatgccgccaaattagacaagattttcgcaaagccgtttgttgga
gcaatggatgggcatatagatgctatttcgtgtatggcaaaaaacatgaaccacttggta
ggaatattctccggttcaatggatggagatattcggcattgggatatagcttccaggcgc
acagttcatcagtttcctggccaccaaggtgctgtgcgaggtttagcagtctctacagat
ggacgtgttcttgtctcttgtggaactgattgcagtgtcaggctctgggccgtacctatt
tctactgcgatggagctagatgtctcatctgacaagtctgttgagccactagagacttat
gtttggaagaatgcatttcggtctgttgatcaccaatggaattttgatcgctttgccaca
ggtggagctggtgtagacatatggaaccacaacaggtctgcaccggaacagagtttggaa
tggggaacagacacagttatatctgtccggtttaatcctggacagcctgatcttttggca
acatccgcaagtgatcgcagcatagcactatatgacttacgcatggggaaaccaacagcg
aagcttatcatggcgacaaaaaccaattctatttgttggaacccaatggagccattcaac
ttcactgctgcaaatgaggactgcaattgctatagctttgattctagaaagcttaatgca
gcaacgtgtgtgcacaaagatcatgtttctgctgtgatggatatagattattctccaact
ggtagagaatttgtaactgggtcttatgatagaacagtgagaattttccagtataatggt
ggtcacagccgggagatttatcatacaaagagaatgcaaagggtgttttgtgtcaagttc
agctgtgatgctagttatgttatttctgggagtgatgacacaaatcttaggctttggaag
gctaaagcatcagaacagttgggagttcttcttccaagggaaaagaaaaggcatgaatat
catgaagctgtcaagaatcgctacaagcacctccctgaagtcaagcgtatagtgaggcac
aggcacttgccaaaaccaatatacaaggcaactggtctccggcgtactatgatcgaagcc
gagcgaaggagagaagagaagaggaaagctcacagtgccccaggaagcattacatcaaag
ccattacggcaaagaagaattgtccgtgttgaggagtga
DBGET
integrated database retrieval system
