Rosa chinensis (China rose): 112172475
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Entry
112172475 CDS
T06020
Name
(RefSeq) alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112172475
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112172475
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112172475
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
112172475
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112172475
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112172475
Prokaryotic type
112172475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-GeneID:
112172475
NCBI-ProteinID:
XP_024165598
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All DBs
Position
6:42888411..42896201
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AA seq
1000 aa
AA seq
DB search
MASLKLPQTLSNSSHGGKALLPFPASSLLPKSTFPVYRARKVAVSTGFITTTTVALFSPN
IFPSRHCSVKQAWSTHFSTRSTSASVQSETDELVEDKAKDLPSSGDSIRRRFLDFYAKRG
HKILPSASLVPDDPTVLLTIAGMLQFKPIFLGQVPKQVPCATTAQRCIRTNDVENVGRTS
RHHTFFEMLGNFSFGDYFKKEAIQWAWELSTVEFGLPADKLWISVFEDDNEAFELWHDEV
GVPAERIKRMGADDNFWTSGATGPCGPCSEIYYDFHPERGYSDIDLNDDTRFIEFYNLVF
MEFNKKDDGSLEPLKQKNIDTGLGLERMARILQKVPNNYETDLIYPIIEKTSELANVSYS
LADDRSKLNLKIIGDHLRAIVYLISDGVVPSNIGRGYVVRRLIRRAVRTGRMLGIKGDGQ
GNLEGAFLPVIARKVIELSTHINPDVRGRAARVFEELKREELKFVQTLERGEKYLDQMLV
EALLTAKESGTIPCLSGKDAFLLYDTYGFPVEITTEVAEERGVSIDMHGFDIEMENQRRQ
SQAAHSAVKLAMGNSSDLTKNVPDTEFLGYDTLSARAVVESLIVDGNPVIQVSEGNDVEV
LLNRTPFYAESGGQIGDHGFLYIPGENQHKVVMEIIDVQKSLGNIFVHKGTIREGVLEVG
REVEAAVDARLRQRAKVHHTATHLLQSALKKVIGQETSQAGSLVAFDRLRFDFNFHRPIT
DSELEEIEKLVNMWIGDATLLQTKVMPLADAKGAGAIAMFGEKYGEEVRVVEVPGVSMEL
CGGTHVSNTSEIRGFKIISEQGIASGVRRIEAVAGEAFIEYVNSRDYYMKQLCSTLKVKA
EEVTNRVDNLLEELRMTRNEVSSLREKAAVYKASQLAAKAVSVGTSNIRVLVESLDDTDA
DSLKKAAEYLIDTLQDPAAVILGSCPGDEKVSLVAAFTPGVVKLGIQAGKFIGPIAKLCG
GGGGGRPNFAQAGGRKPENLSDALEKARSEIFLRLSEKAS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctgaagctcccacagactttaagcaatagcagccacggcgggaaagccctc
cttccatttcccgcttcgagcttattgcccaagtcaacattccccgtctacagagctcgc
aaagttgccgtttccaccggctttattacgacaacaactgtagccctcttttctcccaat
atctttccctccaggcactgcagtgtaaaacaagcttggagcacacattttagcactaga
agtacatcagcatctgtacagtctgaaacagatgaactagtggaggataaggccaaggat
ctgccttcgagtggggattctatacgccgtcgatttcttgatttttatgctaaacgtggt
cataagattcttccaagtgcctctcttgtgccagatgatcccacagttctactcacgatt
gcaggaatgcttcaatttaagcctatattccttggtcaggttccaaaacaagtaccttgt
gctacaactgctcaaaggtgcatacgtacaaatgatgtggagaatgtaggtcgaacatcc
cgacaccacacattctttgagatgcttggaaacttcagttttggagattacttcaagaag
gaagcaatccagtgggcatgggagctttcaactgtagagtttggattaccagcggacaaa
ttatggattagtgtgtttgaagatgacaatgaagcttttgaactttggcatgatgaggtg
ggtgttcctgctgagcgaataaagagaatgggtgcagatgacaacttttggaccagtgga
gcaactggtccttgtggtccatgctcagagatttattatgatttccatcctgagagggga
tattcagacattgatctcaatgatgataccaggtttatagagttttacaatttggttttt
atggaattcaacaaaaaggatgatggttcgcttgaacccttaaagcagaagaatatagat
actgggcttggcctggagcgtatggctcgaatccttcagaaggttccaaacaactatgaa
actgacctgatttatccaattatagagaagacctcagaattggcaaatgtatcatatagc
ctagctgatgatcgttcaaaattgaacctcaaaattataggagatcatttgcgtgcaatt
gtctatctcatatcagatggtgttgttccctcaaatattgggagaggttatgtagttcga
cggctaatcagaagggctgttcgtactggtaggatgcttggtataaagggcgatggtcag
ggaaaccttgaaggagcatttttacctgtcattgcaagaaaagtaatagagttgagcacc
catattaatccggatgtaaggggtagagcagcccgtgtttttgaagagttgaaaagggaa
gaactaaaatttgtacagacactggagagaggagaaaagtatctggatcaaatgctagtt
gaggcactattaactgccaaagaaagtggaactataccgtgcttgtctggcaaagatgca
tttcttttgtatgatacatatggatttcctgtcgaaataacaacagaagtggctgaagaa
cgcggtgttagtatcgatatgcatggttttgatattgaaatggaaaaccaaaggcgtcaa
tctcaggctgcacatagtgctgttaaacttgccatgggaaatagttcagatcttacaaag
aatgttccagacactgaatttcttggatatgataccctttctgcaagagcagtagtggaa
agtcttatagtggatgggaatccagtcatacaggtttctgaaggaaatgatgtagaagta
ttgttgaacagaactccattttatgcagaatcaggtggtcagattggagatcatggattt
ttatatatcccaggtgaaaaccaacataaggttgtgatggaaataatagatgtacaaaaa
tcattgggtaacatatttgttcacaagggtacaatcagagagggagttctagaagttggc
agagaagttgaagcagcagtggatgcaagactcaggcagcgagctaaggtgcatcatact
gctactcatttgctgcaatctgcacttaagaaagttataggtcaggaaacttcacaagct
ggttcactggtggcttttgaccgtctaagatttgatttcaacttccaccggccaatcact
gacagtgagcttgaagaaattgaaaaattggttaatatgtggattggggatgcaacactg
cttcaaacaaaagtgatgcctcttgctgatgcaaaaggggcaggggctatagcaatgttt
ggtgaaaaatatggtgaagaggtacgtgtcgtagaggttcctggtgtatccatggaactc
tgtggtgggactcatgtgagcaatacttctgagatacgtggtttcaaaataatttcagag
caaggtatcgcatctggagtcaggcgaatagaagctgtggctggtgaagcttttattgaa
tatgtcaattccagagattattatatgaaacagctgtgttccaccctcaaagtgaaagct
gaagaagtaacaaacagggtagacaatctcttagaggagttacgaatgacaaggaatgaa
gtttctagtttgcgtgaaaaggctgctgtttacaaagcatcacagttggcagccaaggcg
gtttctgtgggaacttcaaatatcagggtactagttgaatctctggatgatactgatgct
gattcactaaaaaaagcagctgaatatctaatagatacgctacaagatccggcagctgta
attctgggctcttgtcctggtgatgagaaggtaagtttggttgcagcattcactccaggg
gttgtgaagttgggaatacaggcagggaagtttatagggcctatagctaagctgtgtggt
gggggagggggtggaagacccaattttgctcaggccggtgggaggaagcctgagaatttg
tcagatgcacttgaaaaagctagatcagaaatcttcttacgtctctctgaaaaggcaagc
tga
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