Rosa chinensis (China rose): 112172501
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Entry
112172501 CDS
T06020
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112172501
04121 Ubiquitin system [BR:
rcn04121
]
112172501
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112172501
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112172501
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112172501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
CxC4
zf-Nse
Rad50_zn_hook
Prok-RING_1
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
112172501
NCBI-ProteinID:
XP_024165637
LinkDB
All DBs
Position
6:62693104..62695557
Genome browser
AA seq
298 aa
AA seq
DB search
MSSGRNTHWCYECRRPTQLQGRDAVCRNCSGGFVQELDDMVHISPLADEDRDRRFGFMDA
FSAWQQLTDRRGSENIRGRSDLVPEHSPAFSPLLIFGGQIPVRFGNGAFEALFNGSPGIG
VTRGNVGDYFVGPGLEELFEQLSANDRRGPPPASRLSIDAMPTIKITNKHLRSDSHCPVC
QDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHPQGSGSGHSSNIRSGGFG
SNTGGREGQGRRNLFSSLWPFRSSSSSSSSNRNPPHESSPPTTRENSNQMGYSGWPFD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcggtcgaaacacccattggtgttacgaatgcaggcggccaactcagttgcaa
gggcgagatgcagtttgccgaaactgcagtggaggatttgttcaagaacttgatgacatg
gttcatatcagcccactggctgatgaggatcgtgataggaggtttggattcatggatgct
ttctcagcttggcagcagttaacagacagaagaggtagcgaaaatataaggggtagatca
gatttagttcctgaacattccccggcgttttctcctttgttgatttttggtggccaaatt
cctgttcgatttgggaatggtgcatttgaagctctgttcaatgggtctcctggaataggt
gtaacgcggggtaatgtgggtgattattttgttggtcctggcttggaagaattgtttgag
cagctttcagcaaatgataggaggggccctccccctgcatcgaggctttcaatcgatgca
atgccaactattaagatcacgaataagcatcttcgttctgattcgcattgccctgtttgc
caagacaaatttgagctgggatctgaagcaaggcaaatgccatgtaagcatgtatatcac
tcagattgtattgtaccatggctagtccagcacaactcatgccctgtttgccgccaagaa
ctgcatccacagggatctggaagtggtcatagctcaaacattagaagtggtggttttggt
agtaataccggtggaagggaaggccaaggaagacgaaatcttttctcttctctgtggccg
tttcgctcgtctagttctagctctagttctaaccgtaacccaccacatgaaagcagcccg
ccaactacgcgtgaaaatagcaatcaaatggggtattcaggatggccctttgactaa
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