Rosa chinensis (China rose): 112172583
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Entry
112172583 CDS
T06020
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00061
Fatty acid biosynthesis
rcn00071
Fatty acid degradation
rcn01100
Metabolic pathways
rcn01212
Fatty acid metabolism
rcn04146
Peroxisome
Module
rcn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112172583
00071 Fatty acid degradation
112172583
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112172583
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcn01004
]
112172583
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112172583
Enzymes [BR:
rcn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112172583
Lipid biosynthesis proteins [BR:
rcn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112172583
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
112172583
Exosomal proteins of breast cancer cells
112172583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
112172583
NCBI-ProteinID:
XP_024165753
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All DBs
Position
6:57636835..57642863
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AA seq
695 aa
AA seq
DB search
MVPTYVVGALVPLLLTLLLQKSKKETKRGLLVDAGGEPGYAVRNHHSTSPVESAWEGIST
LAQLFEQSCNRFQNKCFLGTRALLARELEVTKDGKSFEKLHLGDYEWLTYGKAFQVVCNF
ASGLSRLGHKREERVAIFADTREEWFLALQGCFRRNVTVVTIYASLGEEALCHSLNETEV
TTVICGHKELEKLVAISGQLDTVNHIICMDDDIPSSASSVDSRWRITSFADVEKLGRENP
VDPELPLPADIAVIMYTSGSTGLPKGVMMTHANVLAVTSAVMTIVPGIGTKDIYMAYLPL
AHILELAAENVMVAAGSAIGYGSPLTLTDTSSKIKKGTKGDATALLPTLLTAVPAILDRV
RDGVLNKVNAKGGLSKKLFELAYARRLSAVNGSWFGAWGLERILWDFLVFRKVRAILGGR
IRYMLSGGAPLSGDTQRFINICIGTSIGQGYGLTETCAGGTFSEFGDTSVGRVGAPLPCS
FVKLIDWPEGGYLISDSPMPRGEIVIGGPNVTVGYFKNEEKTNESYKVDEKGMRWFYTGD
IGQIHADGCLEIIDRRKDIVKLQHGEYVSLGKVEAALSVCRYIDNIMVHADPFHSYCVAL
VVASRTTVEDWAAKQGITFSEFSDLCEKEETRKEVQASLLKEAKKARLQKFEIPAKIKLL
FEPWTPESGLVTSALKLKRDIIRKAFSEDLSKLYA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggttcctacctatgttgttggtgcccttgttccgcttttgttaactcttttacttcag
aagtccaagaaggaaaccaaacggggtttgctcgttgatgctggtggggaacctggctat
gcagtccggaaccatcattctacttccccggtggagtcagcttgggaagggatttcaact
cttgctcaactttttgagcagtcgtgcaaccgattccaaaataagtgctttcttgggacc
cgggcattgctggcaagggagcttgaagttacaaaggatgggaaatcctttgagaagctt
catttgggagactacgagtggctaacttatgggaaggcatttcaagttgtgtgcaacttt
gcttctggtttgagtcggcttggacataaaagggaagaacgagtagcaatctttgctgac
actagagaagagtggttccttgcattgcagggttgttttaggcgcaatgtcactgttgtt
accatatatgcatctcttggggaggaggctttatgtcactcattaaatgagacagaagtt
acaactgtgatttgtgggcacaaagaactggagaaacttgtagccataagtggacaactt
gacacagtgaaccacatcatatgtatggatgatgatatcccatctagtgcttcgtctgtt
gatagcaggtggagaatcacttcatttgcggatgttgagaaacttggacgagaaaaccct
gttgatcctgaattacctcttcctgcagatattgcggtcattatgtatacaagtggaagt
acaggattgcccaagggtgtaatgatgacacatgctaatgtcctagctgttacttctgct
gtcatgaccattgtccctggtattggaaccaaggatatctatatggcatatctccccctt
gctcatatcctggaattagcagcagagaatgtcatggttgctgctggaagtgctataggg
tatggatctcctttgactcttacagatacgtcaagtaaaataaaaaagggaacaaagggg
gatgcaactgcgcttttgccaactttattgacagctgttcctgcaattcttgatcgtgtt
cgagatggggtgctcaataaggtaaatgcaaaaggtgggctatccaagaaattgtttgag
ttggcatatgctcgtaggttgtctgctgtgaatggcagctggtttggggcctggggcctg
gaaaggattctgtgggactttcttgtgtttagaaaggtccgtgcaattctaggaggtcgc
atccgttacatgctatctggtggtgctcctctttctggtgatactcaaagattcatcaat
atttgcattggtacttcaattggtcaagggtatggtctcacagaaacttgcgctggcgga
acattctcagagtttggtgatacctctgttggtcgcgttggagctccacttccctgttca
tttgtcaagttaattgattggcctgaaggaggatatctgattagtgattccccaatgcct
cgtggagagatagtcattggtggtccaaatgttacagtcggttatttcaaaaatgaagaa
aaaacgaacgaatcttacaaggttgacgagaaaggaatgaggtggttctatacaggtgac
atcgggcaaattcatgccgatggttgccttgagataattgaccgtaggaaagatatagtt
aagcttcaacatggggagtatgtctccttaggaaaggttgaggctgctctttcagtgtgc
cgctatattgacaatatcatggtgcatgctgatccttttcatagttactgtgtggctctc
gtggttgcttctcgaaccacagtggaagattgggctgcaaagcaaggaattacttttagt
gagttttcagacttgtgtgagaaagaagaaaccagaaaagaagtgcaagcatcactgtta
aaggaagcaaagaaggcgcgtttgcagaagtttgagatccctgcaaaaatcaaattgctt
tttgagccatggactcctgaaagtggcctggtcacctcagctctcaagctcaaaagagat
atcattcggaaggctttctctgaagacctctccaagttatacgcttga
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