Rosa chinensis (China rose): 112172678 Help Entry 112172678         CDS       T06020                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL3   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism rcn  Rosa chinensis (China rose) Pathway rcn04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:rcn00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     112172678  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rcn04121]     112172678 Enzymes [BR:rcn01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      112172678 Ubiquitin system [BR:rcn04121]  Ubiquitin ligases (E3)   HECT type E3    112172678 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT Arm ARM_ARMC5 HEAT_EZ TFIIA Motif Other DBs NCBI-GeneID:  112172678 NCBI-ProteinID:  XP_024165885 LinkDB All DBs Position 6:complement(7192528..7202943) Genome browser AA seq 1903 aa AA seqDB search METRSRKRAEATSSAPSSSTSSGRTTRSTKRSRLSSSSLSSSVNPSPISTRSRASRANNQ DTAAFAVAASATTAMDSTNESSGSRGRRSRNSDKDDKGKEKEHEVRVRDRERERERERER ERVLDRETERNLGLNMDGGGNGDDDDNDNDSEGGVGILHQNLTSASSALQGLLRKIGAGL DDLLPSSAMGSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFS VDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEY MDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSD AADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAESFASLPDKLDELCNHGLVAQSASL ISTSNSGGGQSSLSTPTYTGLIRLLSTCASGSPLGAKTLLSLGISGILKDVLSGSGSSSN TTVSPALSRPAEQIFEIVNLANELLPPLPQGTISMPSSFNLFMKGPIVKKSSGSSSGKPE DTSGSTPEVSAREKLLNEQPGLLQQFGMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYF SPAEMIESLLSMTNIASFLAGVLAWKDPHVLVPALQIAEILMEKLPKTFSKVFVREGVVH AVDQLILAGTPNSVTSQVSSAEKDNDCVPGSSRSRRYRRRNSNSNPDGNSLEESKIPASV TVGSPPSSVEIPTVNSSLRVAVSTCAKAFKDKYFPSDPGAGEVGVTDDLLHLKNLCVRLN AGVDDPKTKAKGKSKASGSRLVDSSANKEEYLIGVVAEMVAELSKGDGVSTFEFIGSGVV AALLNYFSCGHFSKERISEANLPKLRQQALKRFKSFVAVALPFSIDEGRVAPMTIIVQKL QGALSSLERFPVVLSHSSRSSTGSARLSSGLSALSQPFKLRLCRAQGEKALRDYSSNVVL IDPLASLAAVEEFLWPRIQRSDSGQKAAASAGNSESGNTPTGAGASSLSTSNPASTNRRH STRSRTSVNIGDAAKREPSQEKSTSSSKGKGKAVLKPSQEEARGPQTRNAARRRAALDKD VQMKPVNGDTTSEEEELDVSPAEIDDALVIEDDDISDEEDDDQDDVLRDDSLPVCTPDKV HDVKLGDSAEDTTVASATSDSQTNPASGSSSRAAAVRGSDSVEHRSSNSYGSKGAMSFAA AAMAGLGSGSRGIRGGRDRQGRPLFGGSSDPPKLTFTSGGKQLNRHLTIYQAIQRQLVLD EDDDERYAGSDLMSSDGSRLWSDIYTITYQRADSQAERASVGGASSTPPSKSSKSGSSNS NSDSQLHRMSLLDSILQGELPCDLEKSNPTYNILALLRVLEGLNQLAPRLRTQIVSDSFA EGKISNLDDLSTTGARVVSEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFL FPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSNEREVRVGRLQRQKVRVSRNRILDS AAKVMEMYSSQKSVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVRLGMWRSNSSLEKAPM DIDGDDQKDEKSNVDIVQAPLGLFPRPWPPNAASSDGNQFSKVIEYFRLVGRVMAKALQD GRLLDLPLSTAFYKLLLGQELDLHDVLSFDAELGKTLQELHNLVSRKLYLESNGDNRDAI AELRFRGASIDDLCLDFTLPGYPEYVLKPGDENVDINNLEEYISLVVDATVKTGIMRQTE AFRAGFNQVFDISSLQIFTPHELDYLLCGRRELWETETLADHIKFDHGYTAKSPAILNLL EIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTANNAAANGTGASELA DDDLPSVMTCANYLKLPPYSTKDIMYKKLLYAINEGQGSFDLS NT seq 5712 nt NT seq  +upstreamnt  +downstreamnt atggaaactcggagccggaagcgggcggaggccacctcatcagccccttcatcatcaact tcgtctggtcgcaccactcgttccaccaagcgctctcgtctctcctcctcttcgctttct tcttctgttaacccctcaccaatctccactcgctctcgggcctctagggccaacaatcaa gacaccgccgccttcgccgttgcagcatcggccaccaccgcgatggactccaccaatgaa tcgtccggctcgcgcggccgccgcagtaggaattccgataaggatgataaggggaaggag aaggagcacgaggttagagtcagggatagggagagagagagggagagggagagagagaga gagagggtgttggatagagaaacggagaggaacctggggttgaacatggacggcggagga aatggtgacgacgatgataatgataatgatagcgaaggtggggttgggattttgcatcag aatttgacttcggctagtagtgcccttcaggggcttcttaggaagatcggcgccggattg gatgacctgcttccatcttcggcgatgggctctgcttcgtcatcccaccagagcggaagg ctgaagaagattctgtctgggttgcgagctgatggagaagaaggaaagcaggtggaggct ttgacgcagctgtgtgaaatgctttcgattggtactgaggaatcgctcagtactttttca gtggattcatttgtgcctgtgcttgtggggttgcttaatcatgagagcaatcctgatatt atgcttctcgcagccagagcacttactcatctttgtgatgtgcttccgtcatcatgcgct gcagttgtgcattatggtgccgtttctatcttctgtgcaaggttgttgaccatagagtac atggacttggctgaacagtcactgcaagctctgaagaaaatatctcaggaacacccaact gcctgtctacgagctggtgctcttatggcagtgctttcttatctggatttcttttccaca ggagtccagcgtgtggcattatcaactgctgcgaatatgtgcaagaaacttccttcagat gcagctgactttgtgatggaagctgtcccattactgactaatcttctgcaatatcatgat gctaaggttttggagcatgcttctgtatgtctgactcgaattgctgaatcatttgcatca ttgcctgacaaacttgatgaactatgcaaccatggactagttgctcaatctgcatccctt atttctaccagcaattctggaggtggtcagtcatctctcagtacacctacttatacgggc ttaatccggctactttcaacctgcgcaagtggttctccattaggagctaaaactttgctt tctctagggataagtggcattctcaaagatgtactttcgggttcaggcagttcttccaac actacagtttctcctgctctaagcagaccagcagaacagatttttgagattgtcaatctt gcaaatgagctgcttcctccacttccacaaggaaccatctccatgccgtccagtttcaat ttgtttatgaaaggacctattgtgaaaaagtcatctggtagtagttctgggaagccagaa gataccagtggaagcactcctgaggtttcagctcgtgagaaattattgaacgaacagcct ggtcttcttcagcaatttggaatggatctccttcctgttttaatacagatttatggctct agtgtaaatggccctgttcgccacaaatgtctatcggtcatcgggaagttaatgtacttc agccctgcagagatgattgagtctttgttaagtatgacaaatattgcaagtttcttagcc ggtgttttagcatggaaagatccgcatgtcttggttcctgctctccaaattgccgagata ctcatggagaagcttcccaagactttctccaaggtgtttgtcagagaaggtgtggttcat gctgttgaccaacttattttagctggtactccgaattcagttacttcacaagtctcttct gctgaaaaggacaatgattgtgtgccgggatcatcacgttctaggcgttatagacgtcgc aacagtaactcaaatccagatggaaattcattggaagaatcgaagattcctgcttcggta accgttggttcgcctccaagttcagtggagattccaactgtcaactccagccttcgtgta gctgtgagtacatgtgcaaaagcgtttaaggacaagtacttcccttcagaccctggggcg ggtgaagttggtgtcactgatgatctattacatttaaaaaatctgtgtgtgaggttgaat gctggtgtggatgacccaaaaacaaaagcaaagggaaaatcaaaagcttctgggtctcgc ttagttgatagttctgcaaataaggaagagtatttgattggtgtcgtagccgagatggta gccgaactaagcaaaggggatggtgtgtctacctttgagttcataggtagtggtgttgtc gcagctttgctgaactatttttcttgtggtcacttctcaaaggagagaatttcagaagct aatttgcccaagcttcgtcaacaagccctcaagaggtttaagtcgtttgttgctgttgct cttcctttcagtattgatgaaggaagagtagccccaatgactatcatagttcagaaacta caaggtgctttgtcctctttagagcggttccctgttgtgctgagtcattcatctaggtca tctactggaagtgcacgcctctcctctggacttagtgcattatcccagccctttaagttg cgtctatgtcgagcacaaggagaaaaggctctccgagattattcatcgaatgttgtactg attgacccattagcaagcttagctgctgttgaagagtttctttggcctcgaattcagcga agtgattctggtcagaaggctgctgcatctgctggaaattctgaatctggaaatactcct acaggagctggtgcttcatctctgtctacttcaaatcctgcttctaccaatcgtcgccat tcaactcgttccagaacatctgtaaatataggcgatgctgctaagagggaaccttcacaa gagaagagcacgagctcatctaaaggaaagggtaaagcggttttgaaaccttctcaggag gaagcaagaggccctcaaacaaggaacgcagctcgcagaagagcagctcttgataaagat gttcaaatgaaacctgtgaatggggacacaacttctgaggaagaggaattggatgtatct cctgctgagatcgatgatgcattggttattgaagatgatgatatctcagatgaagaagat gatgaccaggatgatgttctcagagatgactctcttcctgtttgcacgccagacaaagta catgatgtgaaattgggagactctgctgaggatactactgtagcttctgcaacaagtgac agccagactaaccctgcttctggatctagtagcagagctgctgcagttagaggatcagat tctgttgaacacaggagtagtaattcttatggttctaaaggtgcaatgtcgtttgctgct gcagcaatggctgggcttgggtcgggtagccgcggtatcaggggaggtagagaccgacaa ggacgccctctttttggtggttcgagtgatcctcccaagttgacctttacatctggggga aagcagctgaatcggcatttgactatctatcaggccattcagagacagctagtgttggat gaggatgatgatgagagatatgctggcagtgatctaatgtcaagtgatggtagcaggctg tggagtgatatttacactatcacctaccagagggcagacagtcaagctgagagggcatct gttggaggggcaagttcaacgcctccgtcgaaatctagcaaatcaggttcttccaattct aattccgattcccaactgcatcggatgtcacttcttgatagcattttgcagggagaactt ccttgtgatttggaaaaatctaatcctacatataatatactggcactactgcgagtactg gagggcttgaatcagctcgcaccccgtttgagaactcagatagtttctgacagttttgct gaggggaaaatctcaaatttggatgacttgagtacaactggtgctagggttgtttctgag gaatttattaacagcaaactcactcccaaattagcccgacaaatacaagatgctcttgca ttgtgcagtggcagtcttccttcgtggtgctatcagttgacgaaagcatgcccctttttg tttccttttgagactcgaagacagtatttctactcgaccgcttttggattatctcgtgca ctgtatcgtcttcagcagcagcagggtgctgatggtcatggatcaaacgaacgagaggtg agagttggaagattgcaacgtcaaaaagtccgtgtctctcgtaaccggattttggactcc gctgcaaaagtaatggagatgtattcgagccagaagtctgtacttgaagtagaatatttt ggtgaggtgggcactgggttgggtcctacacttgagttctatacacttctaagtcatgac ttacagaaagttagacttggtatgtggaggtcaaattcttcattggagaaagcaccaatg gatattgatggagatgatcagaaagatgagaaaagcaatgttgacattgtccaagctcct cttgggttgtttcctcgtccctggcctccgaatgctgcttcttctgatggtaaccaattt tctaaagttattgagtatttccggttggtcgggcgtgtaatggcgaaggctcttcaagat gggaggctattagacttaccactatcaacagcattttataaactattgcttggccaagag cttgatttacatgatgttctttcctttgatgccgagcttgggaagactttgcaagaatta cataaccttgttagccggaaactatatctagaatcaaatggtgacaatcgcgatgcaatt gctgaattgcgttttcgtggggcttcaattgatgatctctgcttagattttacgcttcct ggttatccggagtacgtgttgaaacccggagatgaaaatgttgatatcaataacttggaa gaatatatatctttagtcgttgatgcaacagttaagactggaataatgcggcagacagaa gcatttagagcggggttcaatcaggtgtttgatatatcatctttacaaatattcacccca catgaattggactatctgctttgtggccgtagagagctgtgggagaccgagactcttgct gatcacataaagtttgatcatggatacactgcgaagagccctgcaatactcaatttgctt gagatcatgggtgagttcacgcctgagcagcagcgtgccttttgccagtttgttactggt gcacctaggcttccccctggtggtttggcagtgctgaatccaaagctgactattgtgaga aagcattcttcaactgcaaataatgcagcagccaatgggactggggcttcagaattggca gatgatgatctgccaagtgttatgacatgcgctaattacctaaagcttcctccttactct accaaggatattatgtacaagaaactactctatgcaatcaatgaagggcagggatccttt gatttgtcatga

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