Rosa chinensis (China rose): 112172805
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Entry
112172805 CDS
T06020
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112172805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112172805
Membrane trafficking [BR:
rcn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112172805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
PCRF
Motif
Other DBs
NCBI-GeneID:
112172805
NCBI-ProteinID:
XP_024166061
LinkDB
All DBs
Position
6:complement(39415410..39422155)
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AA seq
567 aa
AA seq
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MVLVSAVRDYISRMLQDISGMKVLILDSHTVSIVSVAYSQSELLKKEVFLVELMDSISKS
REPMSHLKAIYFVAPTSENIQYLRRHLATPRFGEYHLFFSNILKDTQIHILADSDEHEVV
QQVQEFYADFVAIDPYHFTLNMPSNHIYMLPAVVDHSNLQRFCDRVVDGIASIFLALKRR
PVIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEISPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLKSIGKFPKDQQEVVLSSEQDEFFKKNMYENFGDIGMNIKQLV
DEFQHISKSNQNIQTIEDMAKFVDSYPEYRKMHGNVSKHVSLVTEMSKLVEERKLMLVSQ
TEQELACNGGQMAAFEAVTNLLNNESVADIDRLRLVMLYALRYEKESPVQLMQLFNKLSS
KIAKYKPGLVQFLLKQAGVDKRTGDLFGNRDFLNIARNMARGIKGVENVYTQHQPLLSQT
MESITKGRLRDVDYPFVGNHFQQGRPQEVIIFIVGGTTYEESRAVALQNATNSGIRFILG
GSVVLNSKRFLKDLEEAQKQARISNAI
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtctcggccgtccgcgattacataagccgcatgctgcaggacatctccggc
atgaaggtcctcatcctcgattcccacacggtcagcatagtgagcgtggcgtattcgcaa
tccgagcttctgaagaaggaagtgttcttggtggaattgatggactcgatttccaagtcg
agagagccgatgtcacatctcaaagccatttacttcgttgcgcctacttccgagaacatt
cagtatttgcgacgacacttggctactcctcgatttggagagtatcatctctttttctcc
aacatattgaaggatactcagattcatatcttagccgattcggatgagcatgaagttgta
caacaagttcaggaattctatgcggactttgttgcaatcgatccttatcatttcactttg
aatatgccatcaaaccacatatatatgctcccagctgttgtagatcattcaaatttacag
cgcttctgtgaccgagttgttgatggtattgcatctatttttctggcgttgaaacgaaga
cctgttattcgttatcaaagaacatctgatatcgcaaaaaggattgcacaggaaactgcg
aagctgatgtaccagcaagaaagtgggctattcgatttcagacgaacagaaatttctcca
ttattgctggtaattgataggagggatgatcctgtaaccccgctactgaatcagtggact
tatcaggcaatggttcatgaattgattggcattcaagacaacaaagttgacttaaaaagc
attggaaagtttccaaaagatcaacaggaagttgtgctatcatctgaacaagatgaattt
ttcaaaaagaatatgtacgaaaactttggtgatattgggatgaatatcaagcagttagtt
gatgaatttcagcacatttccaaaagtaaccagaacattcagacgatagaggacatggcc
aaatttgttgacagctacccagagtatagaaagatgcacggaaatgtttcaaagcatgtg
tcacttgtaacagaaatgagcaagctagttgaagagcgtaaacttatgttagtttcacaa
acagaacaggagttggcctgtaatggtgggcagatggcagcttttgaggcagtgacaaat
ctattgaacaatgaaagtgtagctgatattgatcgcctacgacttgtaatgttgtatgct
ttgcgttatgagaaggagagccctgtacaattgatgcaacttttcaacaaactatcatcg
aagattgccaagtacaaacctgggctggtccagttcctcttgaagcaagcaggtgtggat
aagcgcactggcgatctttttggaaatcgagatttcttaaatattgcacgtaacatggct
cgtgggattaagggagttgagaatgtgtatacacaacaccagcctcttctctcccaaact
atggaaagtattaccaagggacgactgagagacgtggactacccatttgttggaaatcac
tttcaacagggcaggcctcaagaagtgatcattttcattgtgggtggtacaacatatgag
gagtctcgtgctgtagctttacaaaatgctacgaattcaggaattcgatttatactcggt
gggtcggtggttctaaattctaagaggttcttgaaggacttggaagaagctcagaaacaa
gctcgtattagcaatgccatctga
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