Rosa chinensis (China rose): 112172885
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Entry
112172885 CDS
T06020
Name
(RefSeq) probable inactive chitinase-like protein LaCIC
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00520
Amino sugar and nucleotide sugar metabolism
rcn01100
Metabolic pathways
rcn04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112172885
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112172885
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
112172885
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
Motif
Other DBs
NCBI-GeneID:
112172885
NCBI-ProteinID:
XP_024166150
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Position
6:complement(43049635..43051291)
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AA seq
329 aa
AA seq
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MLYLAVSLVSLLLFFNIRGGSAEQCGRQAGGASCPGGQCCSKFGWCGTTPDYCGTGCQSQ
CGGGGGGGGGDIGGLVSKVTFNQILKHRNDGGCPAKGFYTYDAFIAAAKAFPAFATTGDT
ATRKREIAAFLAQTSHETTGGWGTAPDGPYAWGYCFNKEKNPGSYCASDPNYPCAAGKQY
YGRGPIQLSWNYNYGQCGKAIGANLLNDPDLVATDPVISFKTAIWFWMTPQSPKPSCHDV
ITWRWNPSGADQSAGRYSGYGTITNIINGGLECGKGWDGRVADRIGFFKRYCDLLGIGYG
DNLDCYNQKPFGSGLGTYYSSSRESIDVV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacttggccgtgtcattagtttctcttctattgttctttaatatccgaggaggc
tcagcagagcaatgtggaaggcaagcagggggggcttcgtgcccgggagggcagtgctgc
agcaagtttggctggtgtggcactacacctgattactgcgggaccggttgccaaagccaa
tgtggcggtggtggtggcgggggcggtggtgacattgggggtctagtatcaaaggtcacc
tttaatcagatacttaagcatcggaacgatggtggttgccctgccaaagggttttatact
tatgatgctttcattgcagctgccaaggctttccccgcctttgctacaactggtgacact
gccacccgtaaaagagagattgctgctttcttagctcaaacttctcatgaaactactggg
ggatgggggactgcacctgatggaccctatgcatggggctattgttttaacaaggagaaa
aatccaggatcttactgtgcctcggatccaaattatccatgtgctgctggtaagcagtat
tatggccgtggtcctattcaactttcttggaactacaactacgggcagtgtggaaaggcc
ataggagcgaacctgttgaacgacccggaccttgttgccacagaccctgtcatctccttc
aagacagcaatctggttctggatgacccctcagtcacccaagccctcatgccatgatgtc
atcacctggagatggaacccttccggagctgatcagtcagcgggtaggtattccgggtat
ggtacgatcacaaatatcatcaacggtggacttgaatgtggtaaaggatgggatgggaga
gtggcggaccgcattgggtttttcaagaggtactgtgatttgcttgggattggttatggt
gacaaccttgactgttataatcagaagccttttgggtctggactcggtacctattattca
tcctcaagagagtcgatcgatgtagtataa
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