Rosa chinensis (China rose): 112172916
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Entry
112172916 CDS
T06020
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rcn03012
]
112172916
Translation factors [BR:
rcn03012
]
Eukaryotic type
Initiation factors
eIF-5
112172916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
112172916
NCBI-ProteinID:
XP_024166186
LinkDB
All DBs
Position
6:37582953..37590368
Genome browser
AA seq
1378 aa
AA seq
DB search
MGRKKPTARDEENPPPAGGGGGKSKKKNLVIEDDEYSVGTELSEESQVKEEKVPPPSKGK
RGKKGSSKASKGVDEDLDDADEDADEVPQVVFTGKKKGKKKSGGSSAFSSSSFGLLEDED
DKDAEDDEQSGLTGDDEEEDAPVLKFSGKKKPSKSTKKTGASSFTGSAFDAIGDEGDSDG
AVDDESNAADENDDEPAIAFTGKKKASKGGKKGGSVFAAASFGALDDAEEDKDEKNDEDD
DIPQITFSGKKKKSSKASKKSGGNSFSEALLDEEDDEDTSVSKPTSAGDDTVEDEDASMI
TFTGKKKSSKKKGNSVFTAVGEDAGVGSEITDVVEPKQPTTGTSKIEADNSNVSKNKDPE
PSKSKKKKKKSGRTAQEEDDLDKILAELGELSSKPAAPQKEETVEVQPADSQKEEKVEVQ
PDAVAPVDGSAAKEAEEETVESAAAKKKKKKKEKEKEKKAAAAAASVGVKEEKQEQAKIE
PAIEPKKKEVKGKAAEKKVPKHVREMQEALARRQEEEEKKKREEEEKLKKEEEERHKQEE
LEKQKEEAKRKKKEREKEKIQELKKAGLYKTPKQKEEEKRREQKRLQLLRDLPNAVEGVP
PTTDNEKPAKRPLYQKKKSKPAPNQANGAATTKPVESTEGIKEENQQVTVPELDSVGLEK
DDEQESVEVAEKLSEVSESVKENGLEQEEDDGDDDEWDAKSWDDDAVVNLSFKRGFSDEE
VEPVVNKGMKPAVQKTVPSQPIKPHDVENQKKQAEVEVDKGRKKDATAKKEAPNSDSASK
QSEDNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPADNIRERTK
ELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLK
MRNTEFIVALNKVDRLYGWKTCRNQPIGKAMKQQSKDVVNEFNMRVSQIITQFMEQGLNT
ELYYKNKEMGETYSIVPTSAISGEGIPDLLLLLIQWAQKTMVEKLTYSNEIQCTVLEVKV
IEGLGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYQHHSQI
KAAQGIKITAQGLEHAIAGTALYVVGPSDDLDDIKETAMEDMKSVMNRIDKSGEGVCVQA
STLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTP
ESRDLADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAADEAVFPCVLKILPNCVFN
KKDPIVLGVDVLEGIAKVGTPICIPQRDFIDIGRIASIENNHKPVDIAKKGLKVAIKIVG
TNSDEQQKMYGRHFEIEDELVSHISRRSIDVLKTSYRDELSIDEWKLVVKLKKLFEIP
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagaagccgactgctcgtgacgaagagaatccaccgccagcgggtggtggt
ggaggaaaatcgaagaagaagaacctggtgatcgaagacgacgagtattccgtcggaact
gagctatccgaggagagtcaagtcaaggaagagaaggttcctccgcctagtaaagggaag
aggggcaagaaggggagttctaaagcttctaagggagtggatgaggacttggacgatgcc
gatgaggatgcagatgaggttccccaagttgttttcactgggaagaagaagggcaagaag
aagagtggcgggagtagcgcgttcagctcgtccagtttcgggttgcttgaggatgaggat
gataaggatgctgaggatgatgagcaatctggtttaacaggcgatgatgaggaggaggat
gctccggtgttgaaattttcagggaagaagaagccttcaaagtcgaccaagaaaaccggg
gctagttcgtttacagggtcggcttttgatgccattggtgacgaaggggatagtgatggc
gcggttgatgatgagagtaatgcagctgatgagaatgacgatgagcctgcaattgctttt
acagggaaaaagaaggcttccaagggtggaaagaagggtgggagtgtgtttgcagcagcc
agctttggtgcccttgatgatgcggaggaggataaggatgaaaaaaatgatgaggatgac
gatattcctcagattactttctctggtaagaaaaagaagtcatcaaaggcttcaaagaag
agtggtggtaattcttttagcgaagcattgcttgatgaggaagatgatgaagatacttcc
gtttccaaaccaactagtgccggtgatgatacagttgaggatgaagatgcatctatgata
acattcacaggtaagaagaagtcttcaaagaagaaaggtaatagtgtgtttactgcagtg
ggtgaagatgctggggttgggagtgaaattacagatgtagttgagcccaaacaaccaact
acgggaactagtaaaattgaagctgataattctaacgttagtaagaataaagatccagaa
ccttcaaaaagtaagaaaaagaagaagaagagtggaaggactgctcaagaagaggatgat
ttggataagattcttgcagagctaggtgagctttcatcgaaacctgctgctcctcagaaa
gaggagacggtggaggttcagcctgctgattctcagaaagaggagaaagttgaggttcaa
cctgatgcggttgccccagttgatggttctgctgcaaaggaagctgaagaagagactgtg
gaatctgctgcagcaaagaagaagaaaaagaagaaggaaaaggaaaaggagaaaaaggcg
gcggcagcagcagcatctgtaggtgtcaaggaggaaaaacaagaacaagcaaaaattgag
ccagcaattgaaccaaagaagaaggaagtgaaaggcaaagcagctgaaaagaaggtgcct
aaacatgttagggagatgcaagaggcccttgctaggcgacaggaagaagaagagaagaag
aaaagggaagaagaggagaaactgaagaaagaagaagaggagaggcataagcaggaagaa
cttgagaagcaaaaggaggaggcaaagcggaagaaaaaggagagggaaaaggagaagatc
caagagttgaagaaggcaggtttatataaaactcccaagcaaaaagaagaggagaagcgg
cgggagcaaaagagactccaattacttagggatttacctaatgcagtggagggtgtgcct
cctaccacagacaatgaaaaaccggctaaaagacccttgtatcagaaaaagaagtcaaaa
ccagcacccaatcaggcaaatggtgcagctactacgaagcctgtggaaagcacagaagga
ataaaagaagaaaaccagcaggttactgttcctgagctggattctgtgggacttgagaag
gatgatgagcaggaatcagttgaagtagcagaaaagctatctgaagtttctgaatctgtt
aaagagaatggattggaacaagaagaggatgatggtgatgatgatgaatgggatgcaaag
agctgggatgatgatgctgttgttaatctttcatttaaacgtgggttttctgatgaagag
gttgaacctgttgtgaataaagggatgaagcctgcagtgcagaaaaccgttccttctcaa
ccaataaaacctcatgatgttgagaatcagaaaaaacaagctgaggtggaagttgacaaa
ggtaggaagaaagatgctactgcaaagaaagaagcaccaaattcagattctgcctctaaa
cagagtgaagataatcttcgctctcccatttgctgcattatgggccatgttgatactggt
aaaactaagcttctggattgtatccgaggcacaaatgttcaggagggtgaggctggaggt
attactcaacagattggtgctacgtattttcctgcggataatatccgtgagaggactaaa
gaactgaaagctgatgcaaagctgaaggttccaggtctattggtcattgatacccctggc
cacgagtcatttactaatttaaggtcacggggttcaggtttatgtgatattgcaattttg
gttgttgacattatgcatggcttagagcctcaaacaatagagtcactcaatctcttgaaa
atgaggaataccgaattcattgttgcattgaataaggtggacaggctctatgggtggaaa
acctgccgcaaccagccaatagggaaggcaatgaagcaacaatccaaggatgtagtaaat
gagttcaatatgagggtttctcagattatcacccaattcatggagcagggcttaaatact
gaattgtattataagaataaagaaatgggagaaacatacagtattgtacctacaagtgcc
attagtggtgaagggattccagatttgttattactattgattcagtgggcccagaaaact
atggttgagaaacttacttacagcaatgaaattcagtgtacggtattggaggtcaaggtt
attgaaggtcttgggacaacaatcgatgttgtgttggttaatggtgtgcttcatgaaggg
gatcaaatagtcgtttgtggcatgcagggacctattgttacttcaattcgagctttgttg
acaccacatcccatgaaagaacttcgtgtcaagggaacttatcagcaccatagtcaaatc
aaagctgcacaaggtatcaagatcacagcacagggacttgaacatgctattgctggcact
gctctatatgttgttgggcctagcgatgacttggatgatatcaaggaaacagctatggaa
gatatgaaatcagtcatgaataggattgacaagagtggtgagggagtttgtgtacaagca
tctactctaggatccttggaagcattgctagagtttttgaagacgccagaagttaatatt
cctgttagtggtattagcatcggccctgtacacaagaaggatgtcatgaaggccagtgta
atgcttgaaaagaaaaaagagtatgccactatcttggcatttgatgttaaagtgacacct
gagtcccgggaccttgcagatgaattgggtgtgaagatttttattgctgatataatctat
cacttatttgaccaatttaaggcctatatcgacaatctcaaagaggaaaagaagaaggaa
gccgctgatgaagctgtttttccatgtgtgctcaagattttacccaactgtgttttcaac
aagaaggatccaattgtgttgggtgttgatgttcttgaaggcattgcaaaggtagggact
ccaatttgcattcctcagagagattttattgatattggacgcattgcatccattgagaat
aaccacaaacccgtagatatagcgaaaaaggggctgaaggtggctatcaagatagtcggc
acaaattctgatgagcagcaaaagatgtatggtaggcattttgaaattgaagatgagctt
gtcagccatatctccaggaggtcaattgatgtacttaaaacaagctaccgggatgaactg
tcaattgacgagtggaagctggttgtgaaattgaagaaactttttgagataccatga
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