Rosa chinensis (China rose): 112172962
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Entry
112172962 CDS
T06020
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112172962
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
112172962
TFIIIC, fungi type
112172962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_8
TPR_16
TPR_7
TPR_11
TPR_9
ARM_TT21
TPR_1
TPR_12
ANAPC3
TPR_CcmH_CycH
RPN7
TPR_17
Alkyl_sulf_dimr
TPR_15
DUF7017
ARM_TT21_5th
ARM_TT21_4th
HAT_PRP39_C
Coatomer_E
SNAP
BTAD
Motif
Other DBs
NCBI-GeneID:
112172962
NCBI-ProteinID:
XP_024166261
LinkDB
All DBs
Position
6:complement(56357864..56360962)
Genome browser
AA seq
903 aa
AA seq
DB search
MDKNGNASCDRGEALKYVFDLGAEDDIIEDEEEEEEDDDDSDEESEEEDEEEEEEDDTFN
PLDSVDDGSFADQIYPDFVGQEYETLAKKKRKPLGDSRPKGSVKKARKDEGSKESLEEEL
MAFMMGRPRRRSRKLKKRGRRKGSKNQCSPEISRLLSKARNCYALGDYKEAIPVLKEVIK
QAPHLPDSYQTLGDVHSALGDKNRALNCYHVAAHLAPKNPSLWTLIFTKFMEVGNISEAS
TSLSRAISADPEAENVVSLKLDRASLHVQLKDYEKAAALYEEIIQTCPGNVKALKTGAEM
YEKCGQRERSIHVLEEYLRAHPTEADLSVIDLLVSLLMENNLHNEALQHIEHAQLTLHSG
KELPLEMKVKAGICQANLGNMRKAASLFTEFAESNTEFNKGFLHLKIARCYLSLKYRVQA
IFYFYQALKTLEEHIEARLTLASVLLEDSRDDEAISLLSPPRNRDCVHLPTDKATPWWCD
GKVKLKLCNIFRAKGMHKELVDAIYDLVQESLQIISLGRTVKRKLLKKELLERVKALDDQ
QTCNVFSGNRSRALPLPDHRKVNREKKRLEEKAKLKEEKRTEAMAAGHDGQSDDYSDSDD
DPEIDPQEIQKEPPLPDLVKEKENHDLILDLCKSLASLNRHSEALKILKLALKSSKGMAA
FRGKLRNLGAQIAYTNPDPEQGLNYVKYIADQHPYSNAVWNCYYKVISRFKEDWYRDKHY
KFVRHRRHRRNKLKDCAPPSIISGHHYTRKSRHQDAAREYLEAYKLLPENPLVNLCAGTA
LINLAHGHRLQNKHHCIAQGFAFLYNNLRVCKSSQEALYNIARAFHQVGLVTLAASYYEK
VLDIHVKDYPIPKLPHENPDYNQNRLPGYCDLRREAAFNLHLIYKQCGSFDLARQVLRDH
CTF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaacggcaatgctagttgtgatcgtggggaggctttaaagtatgtgtttgat
ttgggtgctgaggatgacattatagaagatgaggaagaagaagaagaagatgatgatgat
agtgatgaagaatccgaagaagaggatgaggaagaagaagaagaagatgacacctttaat
cctttggattctgtagacgatggttcttttgctgaccaaatttacccagattttgtgggg
caggagtatgagactttagctaagaaaaaacgaaaaccacttggggatagtcgccctaaa
ggttccgttaagaaggccagaaaagatgagggttctaaagaaagcttagaggaggaatta
atggcgttcatgatgggcaggccgcgaaggagatcaaggaagcttaagaaaagaggtaga
agaaaaggatcaaagaaccaatgcagccctgaaattagcaggcttcttagtaaggctcga
aattgctatgcacttggggattacaaagaggccatacccgtcttgaaagaagtgattaag
caagcaccgcatttgcccgattcctatcagacacttggagatgtccatagtgctcttggc
gataaaaatagagccttaaattgctaccatgttgctgcacatttagcaccgaaaaatcct
tctttgtggacattaatttttacaaagttcatggaagtagggaacatttctgaagcttcg
actagcctttcgagagcaatatcagctgatcctgaagccgaaaatgttgtttctctgaag
ttggatcgtgcttcactccatgttcagcttaaagattatgaaaaagctgctgcattgtat
gaagaaataatccaaacctgtcctggtaatgttaaagcactgaagacaggagcagagatg
tatgaaaaatgcggtcagcgtgagcgctctatccatgtgctggaggagtatctcagagca
catccaactgaagctgatttgagtgtcattgatttgttagtttctctacttatggaaaac
aatttacataatgaagctcttcagcatattgagcatgcacaactgacactccattcggga
aaagagctgcctcttgagatgaaagttaaagcaggaatttgccaagctaacctcggaaac
atgcgcaaggcagcaagtctgttcactgaatttgcagagagtaacactgaatttaataaa
ggctttttacatttgaaaattgctagatgttatttgtccttgaagtatagagtacaagca
attttctacttctaccaagctttaaagacacttgaagagcatattgaggctcgattgaca
ttggcttctgttctccttgaagactctagagatgatgaagctatatctctgctgtctcct
ccaagaaatcgagactgtgttcacctcccaactgataaagcaacaccatggtggtgtgat
ggaaaagtgaagctgaagctttgcaacattttcagagctaaagggatgcacaaggaactt
gtggatgcaatctatgatttggtacaagaatcattacagattatatcacttgggagaaca
gtgaaaaggaagctcttgaaaaaggaattgttagaaagagtcaaagccttggatgatcag
caaacatgtaacgttttttcgggaaatagatcacgagcacttcctttaccagatcatcgg
aaagttaacagagaaaagaagcgtcttgaggaaaaggcaaaactaaaggaggaaaagaga
actgaggcaatggctgctggacatgacggacaaagtgatgattattcagattcagatgat
gatccggaaattgatccacaagaaatacagaaagagcctcccctgccggatctagtcaag
gaaaaagagaatcatgacctcatattagatttgtgtaagtcactcgcttccttgaataga
cattctgaagcgttaaagattcttaagcttgctttgaaatcaagtaaaggcatggcagct
ttccgtgggaaacttcggaatcttggagctcaaatagcatacaccaatccggatcctgag
caggggttgaactatgtaaaatacattgcagaccagcatccatacagcaatgctgtctgg
aattgctattacaaagtaatctccagatttaaggaggattggtatcgtgacaagcattat
aaatttgtgcgccacaggcgccataggcgcaacaaattaaaagactgtgcaccacccagt
atcataagtggccatcattatacaagaaaaagtcgccatcaggatgccgcaagagaatac
cttgaagcttataagttattgccagagaatcccctggttaatctgtgtgctggtactgcc
ttaatcaacttggcccatggacatagacttcagaataagcaccactgtattgctcagggc
tttgcattcctctacaacaatttgcgggtttgcaaaagcagccaggaggctttgtacaac
atagccagggcattccatcaagttggccttgtgactctggcagcttcctactacgaaaaa
gttcttgacattcatgtgaaggactaccccataccaaaacttccccatgaaaatccagac
tacaatcaaaatcgattaccaggttactgtgatcttcgcagagaagcagcttttaatcta
catcttatctacaaacagtgcggatcatttgatcttgctcgacaggtcttgagagatcac
tgcaccttttga
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