KEGG   Rosa chinensis (China rose): 112173122
Entry
112173122         CDS       T06020                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112173122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112173122
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112173122
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4
Other DBs
NCBI-GeneID: 112173122
NCBI-ProteinID: XP_024166444
LinkDB
Position
6:62722489..62723936
AA seq 431 aa
MAQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNEKEAKSQGKGSFAYAWALDESV
EERERGITMSVAVAYFDSKNYKVVVLDSPGHRDFVPNMISGATQADAAVLVVDGSHGAFE
AGMKGGQTKEHAQIIKSFGVKQIIVAVNKMDVVGYSKDRFDEIKHTLGTFLWRSCRFENS
SVCWVPLSAMENQNLVSAPSDDRLLSWYSGLCFLDAVDSLQPPKRESDKLLLMPICDVIK
SSKGQVSACGKLQAGALQNGLKVRVMPSGELGTVRSLERDGSQSCSTATAGDNVAVTLQG
IDDRHVMAGGVLCDPDVPVAFAKHLELNVQLLDGAKPLLVGSQLEFHIHHAKEAARVVKI
ASLLDPKTLKVAKRSPRCLLAKQVAVIEVVLQGPVCVVEYSMCRALGNVSLRALGNTVAL
GKVTRIIEKQK
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggctcaactgaatcttgcaattgttggacatgtcgattcgggaaaatcgacactttca
ggtagactgcttcatctattgggaaggatatccaaaaaagaaatgcacaaaaatgagaaa
gaggcaaagtcacagggcaaggggtcatttgcatatgcgtgggcattggatgagagcgta
gaagaaagagaaagaggaataactatgagtgtagctgttgcatattttgactccaaaaat
tacaaggttgttgtgctggactctcctggccacagagactttgtcccgaacatgatctcc
ggcgcaacacaagccgatgctgcagtacttgttgttgatggttcacatggtgcatttgaa
gccggtatgaagggaggacagactaaggagcatgcacagatcatcaaaagcttcggcgtc
aagcagattatagttgctgttaacaagatggatgttgttggctactccaaggatagattt
gatgaaatcaaacacacactaggaacatttctctggcgttcctgtcgtttcgaaaattct
tcggtgtgttgggttccattgagtgccatggagaatcagaacttggtgtcagctccttct
gatgaccgtttgttgtcttggtatagcggactttgcttcttggatgcagttgattccctt
caacctccgaagagagagtctgacaagttactgctcatgcctatatgtgatgtcattaaa
tcttctaaagggcaggtttctgcttgtggtaaattgcaagctggagctcttcaaaatgga
cttaaggttcgggttatgccttcgggagaattagggactgtccggtctttagaacgtgac
ggctctcagtcatgctcaactgccacagctggtgacaatgtggctgttactctacaaggg
attgatgatcgtcatgtgatggcaggaggcgtgctatgtgaccctgatgttccagttgca
tttgcgaaacatttggaattgaatgtgcaacttttggacggggcaaagcctttgttggtt
ggctctcagctggagtttcacatacaccacgcaaaggaggcagcaagagtcgtgaaaata
gcttcattacttgatccgaagactcttaaagtggcgaaaaggtctcctcgctgtcttctg
gcaaagcaggtagctgttatagaggtagttctgcaaggaccagtttgtgtggtggagtac
tccatgtgtagagctctagggaacgtttctttgagagcgttaggaaacactgtggccctc
ggcaaggtaacacgaataatcgagaagcagaagtag

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