Rosa chinensis (China rose): 112173295
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Entry
112173295 CDS
T06020
Name
(RefSeq) RNA-binding protein 1
KO
K14411
RNA-binding protein Musashi
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112173295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112173295
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112173295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
SET1_RBD
Peptidase_M16_C
Motif
Other DBs
NCBI-GeneID:
112173295
NCBI-ProteinID:
XP_024166674
LinkDB
All DBs
Position
6:67490938..67492506
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AA seq
336 aa
AA seq
DB search
MDSDQAKLFVGGFSKDTTEATLKEHFGQYGVVSGSTVTKDRVTSSSRGFGFVWFSDPSSA
DKALEDSHVILGRKVDVKKAKPRRAWAYPIPNPKNQEPLPPQQLQSSSFESGSNFRTRKI
FVGGLSPSVTELEFKNYFEKFGRVTDVVVMMDSATHRPRGFGFITFDSEESVENVMQKNF
HELNGKFVEVKRAVPREESYSNNERGYQPGSNRPRYTGSPTTYGVLPTPAPYNGFGGFTG
GTGVYGGWYPSGGYAGVPYGITPIVPQAWVFPYGNTFYPAYMSGGGWVAAAAGGHNLYNR
VSEPAVNRRGFVIEHAPADVKSSGIEGEKLDVDGAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggactctgatcaagcgaagctcttcgtcggtggtttttccaaggacaccaccgaagcc
acattgaaagaacacttcggccaatacggcgtcgtttcgggctcgacggttaccaaggac
cgcgtcacaagcagttctcgagggtttggcttcgtctggttctctgatccgtcttccgct
gataaagccctagaagactcgcatgtcattctcggaagaaaggtagatgtgaagaaagca
aagcccagaagagcctgggcataccccatccccaaccccaaaaaccaagaaccactgcca
ccgcaacaactgcaaagtagtagttttgagagtggcagtaattttagaacaaggaagatt
tttgtcgggggattgtcgccgagtgtaactgagttggagtttaagaattactttgagaag
tttggtagggtaactgatgtagtggtgatgatggacagcgcaactcaccgccctcggggc
tttggttttatcacttttgattcagaggagtcggttgagaatgtaatgcagaagaacttt
catgagttgaatggtaagtttgtggaggtcaagagggctgtgccgagggaggagagttac
agcaacaatgagaggggttatcagccgggcagtaatcgtcctcgatatactggtagtcct
actacatatggagttcttcctactcctgcaccttataatggtttcggagggtttactggt
ggaacaggtgtttatggcggttggtacccatcgggtggatacgctggggttccttatggc
attaccccaattgttcctcaggcgtgggtgtttccatacggcaacactttttatcctgcc
tacatgagtggcgggggatgggtggcggctgctgctggtgggcataacttgtataacaga
gtgtccgagccagctgtgaatcggcgtggttttgtcattgagcatgcaccagcggatgtg
aagtcgtctgggattgaaggggagaaacttgatgttgatggtgctgcttga
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