Rosa chinensis (China rose): 112173329
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Entry
112173329 CDS
T06020
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9
KO
K14487
auxin responsive GH3 gene family
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112173329
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
112173329
NCBI-ProteinID:
XP_024166710
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All DBs
Position
6:complement(56162992..56165847)
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AA seq
623 aa
AA seq
DB search
MSSSSFFCPDYCSLTINMDGKKLEYKGEEALKEIERLTSKADKVQLDILKEILTRNVETE
YLSKYMRGSREVSDFKQCVPVITYNGIQPYIQRIANGEDSSLITGHPITEMLCSSGTSGR
EPKITPTIAEDLDRRTFLYNLIMPIINQYVPDLDKGKAMFLYFVKAEMSTPCGLPARTVL
TSYYKSNHFKCRGEDPFNNCTSPDQAILCNDSNQSMYCQLLSGLLHRHQVLRLGAVFASA
FLRAISFLERNWVSFCNDIRTGKLDPLITDPDCRTSMAKILSSPDPDLADEISSICSLHS
WKGIVCQLWPKAKYIEAVVTGSMAQYIPALEYYSDGKLPLVCTMYASSECYFGVNLKPLC
DPADVAFTLMPNMGYFEFIPLGGGENGTRVMDIDEDEDVISDKLVDLVHVKLGFYYELVV
TTFAGLCRYRIGDVLQVTGFHNQAPQFRFICRRNVVLSIDTDKTNEEDLHKSITVAKKLL
EPFNALLVEYTSYADTSCVPGHYVLYWEIAHHHGSLSPTVDLINSVATPLDDKVLQECCI
AVEEELDYIYRRCRSHDKSVGPLEIRVVEPGTFEALMDYFISQGGSINQYKTPRGIKSKK
ALKLLDSNVKACFFSPRDPHWIP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctagttctttcttctgtccggattattgttcattgacaattaatatggatggg
aagaagctcgagtacaaaggtgaggaggcattgaaggagattgagaggctcacttccaag
gctgataaagtccagctagacattttgaaagagatcttaaccagaaatgtggaaactgag
tatctgagcaagtacatgaggggatcgagagaggtgtcagacttcaagcagtgtgtccct
gtcattacttataatggtattcaaccttatatccagagaattgctaatggtgaagactct
tctctcataaccggtcacccaattactgaaatgctatgcagctcaggaacttcagggaga
gagcctaagataacgccgacaatcgcagaagatctcgatcgtagaacctttctctacaat
ctcattatgccaattatcaaccaatatgtccctgatctggacaagggcaaggccatgttc
ctctacttcgtcaaggcagagatgtcgacgccgtgcggcttaccggcacggacggtgctc
accagctactacaagagcaaccacttcaagtgccgaggcgaagaccctttcaacaactgc
accagccctgaccaggccattttatgcaacgacagcaaccaaagcatgtattgccagctc
ctctccggcctactccaccgccaccaagtcctgaggctcggggccgttttcgcctctgct
tttcttcgagccatttcgttcctcgaacgaaactgggtcagtttctgcaatgacatacgt
accgggaagttggatcccctaatcacagaccctgattgccgcacatcaatggctaaaatt
ctctcctcccctgatcctgatctggctgacgagatcagcagcatctgtagccttcattcg
tggaagggaattgtgtgccagctctggcctaaggccaagtacattgaggccgtcgtcacg
gggtccatggcgcagtacataccggctttggagtattacagtgatgggaagcttccatta
gtctgcaccatgtacgcatcttcagagtgttacttcggtgtgaacttgaaacccttgtgt
gatcctgctgacgtagcgttcaccctgatgcccaatatggggtattttgagtttataccg
ttgggaggaggagagaatgggacaagggtgatggacattgatgaggatgaggatgtcatt
agtgataagcttgtggacttggtgcatgtgaagcttggcttttactatgaattggtggtc
acaacctttgctggattatgtcgttatcgtattggtgatgtgctacaagtgactggattt
cacaatcaagcccctcaattcaggttcatatgtaggaggaatgttgttctaagcatcgac
actgacaaaactaatgaagaggacttgcacaagagcattaccgtggccaaaaaattgcta
gagcctttcaatgctcttcttgtggaatacacgagctacgctgatacgtcgtgcgtgcct
ggccactatgtattgtattgggagattgcacaccaccatggatcgctgtcaccaacggtg
gacttgatcaacagtgtggccacgccacttgatgataaggtgctccaagaatgttgcatt
gcagttgaggaggagcttgattacatataccgtcgatgccgctcacacgacaagtcggtg
gggccgctcgagatacgtgtggtggagcctggcacgtttgaggctttgatggactacttc
attagccaagggggttccatcaatcagtataagacgccgaggggtatcaagtctaagaag
gcattgaagctgcttgattccaatgtcaaggcctgtttctttagtccaagagatcctcac
tggattccttag
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