Rosa chinensis (China rose): 112173543
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Entry
112173543 CDS
T06020
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00730
Thiamine metabolism
rcn00900
Terpenoid backbone biosynthesis
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Module
rcn_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
112173543
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112173543
Enzymes [BR:
rcn01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
112173543
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
112173543
NCBI-ProteinID:
XP_024166946
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All DBs
Position
6:complement(60033734..60038809)
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AA seq
713 aa
AA seq
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MGAASAGVASHCYGKIGAFSHKVQLFGANFPPRVEFPRTNLYPSPASSISSKEIVTQICS
LPDSGEFFPEEVSTPILDSVENPMHLKNLSLKELKQLSDEIRLELSSIMMKTRKSFKASL
AVAELTIAIHHVFHAPVDKILWDAIEQTYAHKILTGRRALIHTLQRNGLSGSTSHPESEY
DPFGAGHGCNSVSAGLGMAIARDLKGKRERIVTVISNGTTMAGQVYEAMGNAGYFDSNMV
VILNDSRHSLHPKIEEGPKTSITALSSTLSKLQSSKSFRKFREVAKDVTKRIGMHELAAK
VDEYARGMVGPPGATLFEELGLYYIGPVDGHNIEDLICVLQQVASLNSMGPVLVHVITEE
NRGVENNPKLEGAYKQHEGLSSSDDLASRMHRRTYSDCFVEALVIEAEQDKDIVTVHAGM
HMEASFELFRDRFPDKFFDVGMAEQHAVTFSAGLSRGGLKPFCIIPSAFLQRAYDQVVHD
VDRQRIPVRFAITSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSNEDELANMVATAAR
IDDRPVCFRYPRGAIVGMDHSICSGMPIEIGKGKVLAEGKDVALLGYGSMVQNCLKARSL
LSKLGIEVTVADARFCKPLDIKLLRQLCENHSFLITVEEGSIGGFGSHVAQFFALDGQLD
GKIKWRPIVLPDNYIEQASPSEQLAIAGLTGHHIAATALSLLGRNREALHLMC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgcttctgctggagttgcttctcattgctatggaaagattggggctttttct
cataaagtccagttatttggagctaattttccacctcgtgtggaatttccaagaaccaac
ttgtacccaagtcctgcttcctccatatcatccaaggaaatagtcactcaaatatgttct
ctacctgatagtggtgaattcttcccagaagaagtctcgacacccattctcgattcagtt
gaaaatcctatgcacctgaagaacttgtcccttaaagaactgaagcaattatctgatgaa
atccgtttagagttatcatctataatgatgaaaacacggaagtcttttaaagccagtttg
gcagtagcggagttgacaattgcaatacaccatgttttccatgcaccggttgataagata
ctatgggatgctatagaacaaacatatgctcataaaattctaacaggacggcgggccctc
atacatactctgcaaagaaatggtctttctggttctacatcacatcctgagagtgaatat
gatccatttggggcagggcatgggtgcaacagtgtttcagctggacttgggatggcaatt
gcacgggatttaaaagggaaacgagagcgtattgttacagtcatcagcaatggtacaact
atggctggtcaagtctatgaggcgatgggtaatgcagggtattttgactcgaatatggta
gttattttaaatgacagtaggcattctttacacccaaagattgaagagggccccaagaca
tctattactgctctatccagtaccctaagcaagctccagtcaagtaaatcctttcggaaa
tttagagaagttgctaaggatgttactaaaagaatcggtatgcatgaattggcagctaaa
gttgatgagtatgcacgtggtatggtgggtccaccaggagcaactctttttgaagagctt
ggattgtattacattggtcctgttgatggacacaacattgaagacctgatttgtgttcta
caacaagtggcatctttgaattcaatgggtcctgttttggttcatgttataacagaagaa
aatcggggagtggaaaacaacccgaagcttgagggggcatacaagcagcatgaaggttta
agtagttctgatgatttagcgtccagaatgcaccgtagaacttatagcgactgctttgtg
gaggctttagttatagaggcagagcaggacaaagatatcgtgactgttcacgctggaatg
cacatggaagcatcatttgaactattccgtgaccgatttcctgataagtttttcgatgtg
ggaatggctgagcaacatgcagttactttttctgctggtttgtcacgtggagggctgaag
ccattttgcataatcccttctgcatttctacaaagagcttatgatcaggtagttcatgat
gtagatcggcaaagaattccagtgcgttttgccataacaagtgcaggcttggtaggatcc
gatggtcccatgcagtgtggggcatttgatataacatttatgtcatgcttacccaacatg
attgtcatggcaccatccaatgaggatgagcttgccaacatggtggccactgcggcccgc
attgatgatcgtccagtttgcttccgataccctaggggtgccattgttgggatggatcat
tcaatttgcagtgggatgcccatcgagattggaaaagggaaagttcttgcagaaggtaaa
gatgtggctttgcttggatatggatcgatggttcagaactgccttaaggctcggtctctt
ctttcgaagcttggtattgaggtaaccgttgctgatgcgaggttctgcaagcccttagat
attaagcttcttaggcagctttgtgaaaaccattcatttctgatcacggttgaggaaggg
tctattggaggatttggatcccatgttgcacagttctttgcgctcgatggacagcttgat
ggaaaaattaagtggcgaccgattgttttaccagacaactacattgagcaggcatcccca
agtgaacaactagctattgctgggctgactggacaccacatagctgcaacagcgttaagt
ctgcttggccgaaatcgtgaagccctccacttaatgtgctag
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