Rosa chinensis (China rose): 112173568
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Entry
112173568 CDS
T06020
Name
(RefSeq) F-box protein SKP2B isoform X3
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112173568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112173568
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112173568
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_Zer-1
LRR_8
Motif
Other DBs
NCBI-GeneID:
112173568
NCBI-ProteinID:
XP_024166985
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Position
6:complement(40411564..40415811)
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AA seq
369 aa
AA seq
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MVGKENLKTEDLNLCFEKLMMIGGGKVKMEGRVMTDWKDIPMELLLQILTFVDDQTVITA
SGVCRGWRDAICLGITRLSLSWCNKNMNNLVLSLAPKFTRLQTLILRQDKPQLEDNAVQS
IANFCYDLQVLDLSKSFKLTDHSLYALAHGCPNLTRLNISGCSAFSDIALEYLAGFCPKL
KVLNLCGCVRAASDRALQAIGRYCSELQCLNLGWCEEVGDVGVMSLAYGCPDLRTVDLCG
CLQITDDSVVALANGCPHLRSLGLYYCQNITDKAMYSLAQSVVKNKPAAMWESRKSRNDE
EGLKTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVQAHRT
AATFPHSAH
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggttgggaaagaaaacctcaagactgaggacttgaacttgtgctttgagaagctgatg
atgattggtggtgggaaagtgaaaatggaaggaagggtaatgacagattggaaggatatt
ccgatggagctcctgttgcagattctgacatttgtcgatgatcagacggtgatcacagct
tctggagtctgtcgtggttggagagatgctatttgcttgggcatcactcgtctctccctc
tcatggtgtaacaagaacatgaacaacttggtcctatctcttgctcctaagtttacaagg
ttgcaaactctaatactacgtcaggataaaccccaacttgaagataatgctgttcagagc
attgcaaacttctgttatgatcttcaggtcctggaccttagcaaaagcttcaagctcact
gaccactccttgtatgccttagctcatgggtgtcctaatcttacgagactcaacatcagc
ggttgttctgcattcagtgacattgctcttgaatatctggctggattttgcccaaaattg
aaagtattaaatctttgtggatgtgtcagggctgcatcagatagggcattgcaggctatt
ggccgttactgcagtgagttgcagtgtctgaatctcggttggtgtgaggaagtcggtgat
gttggagttatgagtttggcatatggatgccctgacctcagaactgttgacttgtgcggc
tgtctccaaataacagatgacagcgtggttgctttggcaaacgggtgtcctcatctgaga
tcccttggcctttactactgtcaaaacattacagacaaggcaatgtattctttggcccag
agtgtagtgaagaacaagcctgcagcaatgtgggaatccaggaaaagcaggaatgatgag
gaagggctcaagacgctcaacatcagccagtgcacggcactcaccccttctgctgttcaa
gcagtgtgtgactcctttccatcacttcacacctgctctggaagacactccctcatcatg
agtggctgtttgaacttgacatccgtgcattgtgcatgtgctgtccaggcgcaccgcact
gctgccacctttcctcattcagctcattga
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