Rosa chinensis (China rose): 112173578
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Entry
112173578 CDS
T06020
Name
(RefSeq) ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112173578
Enzymes [BR:
rcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
112173578
Ribosome biogenesis [BR:
rcn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
112173578
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
SH3_13
Motif
Other DBs
NCBI-GeneID:
112173578
NCBI-ProteinID:
XP_024167004
LinkDB
All DBs
Position
6:4562461..4565785
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AA seq
283 aa
AA seq
DB search
MQSLAPIQPRFAKCLTTFRAFSSSSSSSDYSNQSRGGLPRFFSECLPSSKGGLVRVQDDE
FWHMTKVLRLRANDRVELFNGKGGLVEGVIQTVDRSGLDFVALEDPKLVLPQSTQWHVFA
AFGTLKGGRADWLVEKCTELGASSVTPLLTERSPTISENRLDRLQRVNMAAAKQCQRLHE
MVLNPPMKIDRLLPLVAQSKLSFLAVAEATPLVTALTSSRRETSGLIVIGPEGDFTEKEV
YELIKAGSISVGLGPHRLRVETATVALLATLMLWSDSQEKCGS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcctagcaccaatacaacctcgtttcgcgaagtgcctcacaacctttcgagca
ttctcatcttcttcttcgtcttcagattactccaaccagtcccgcggtggcctccctcgc
ttcttctccgaatgcctcccttcttccaagggaggcctagttcgcgttcaagatgatgag
ttctggcacatgactaaagtcttgagattacgcgccaatgatagggtagagctgtttaat
gggaaaggaggtttggtagaaggagtaatacaaacggtggaccggtcggggcttgatttc
gtggccttggaagatccaaagttggttcttccacagagcacgcagtggcatgtgtttgca
gcttttggtactttaaagggcggtcgagctgattggcttgttgagaaatgcacggagctg
ggggctagtagtgtaactcctctgctgacagaacgttctcctactatctcggaaaatagg
ctggataggttgcagagagtcaatatggcagctgctaaacaatgtcaacggctccatgaa
atggtattgaatcccccaatgaaaattgatcgtcttttgccccttgttgcacagtccaag
ctatcttttttggcggttgcagaagctactcctcttgttactgcattaacttcgtcaaga
agggagaccagtggactgattgtgattggaccagaaggcgacttcacggagaaagaggtg
tatgaattgataaaagctgggtcaatctctgttggccttggcccacatcgactccgggta
gaaactgctacggtggctcttctggcaactctgatgttatggtctgattctcaagaaaag
tgtggttcctaa
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