Rosa chinensis (China rose): 112173589
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Entry
112173589 CDS
T06020
Name
(RefSeq) probable sphingolipid transporter spinster homolog 2 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112173589
Transporters [BR:
rcn02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
112173589
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Paralog
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Motif
Pfam:
MFS_1
OATP
DUF6161
Gly-zipper_C13G5-2
Motif
Other DBs
NCBI-GeneID:
112173589
NCBI-ProteinID:
XP_024167018
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Position
6:complement(26331123..26341079)
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AA seq
540 aa
AA seq
DB search
MANPQHEEEESKSVVSIASTSLRKSRKSKRPSWFTPKRLLLIFCVINLVNYVDRGAISSN
GVNGNLPICRNGKCKPATGIQGHFLLNNFSVGCLSSAFMVGLLVASPIFAALAKSVNPFK
LIGVGLSIWTFAVTGCGFSFNFLSILICRMLVGVGEASFISLAAPFIDDNAPAAQKTLWL
STFYMCIPSGYALGYVYGGLVGTTLSWRAAFWGEGILMLPFAILGFVMKPLRMKGFKHDE
SIEALTVQETAVSEVQGALDPKDRAVSMKEDVTNSTIHRPSKPKIATKIKNHLSRFMKDM
KDLLVDKVYVVNVLGYVAYNFVIGSYSYWGPKAGYNIYHMTNADMIFGGITIVCGIVGTL
AGGFLLDFMSNTMSNAFKLLSTATLFGAILCFGAFCLKNMYGFLALFAVGQLLLFATQGP
VNFVCLHCVKPSLRPLSMAISTVAIHIFGDVPSSPLVGVVQDHIQNWRSTALILTSVLIP
AAAIWFTAIFMDSVDRYDEESDDEESDDEIETTEMPSLEEKKTEKTTESAAQPVTYSTVV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctcaacatgaagaagaagaatcaaagtcagtcgtctccattgcctcaacc
tcattaaggaaatcaaggaaatcaaagcgtccttcctggttcacacccaagaggttactt
ctcatattctgtgtgatcaacttggtaaattatgtggaccgaggagcaatatcaagcaac
ggcgtgaatgggaaccttccaatttgcaggaatgggaaatgcaaacctgctaccggcata
caggggcattttttactgaacaatttttcagttggatgtctatcgtcagcttttatggtt
ggacttctggtggcttctccaatttttgcagcactagcaaagagtgtaaatccatttaag
ctcattggagttggattgtcaatttggacttttgctgtaactggttgtggtttttcattc
aacttcttgtctatcttaatctgccgcatgctagttggtgttggtgaggcttcgtttatt
agtcttgcagctccgttcattgatgataatgccccagctgctcagaaaactctatggctt
tcaacattctacatgtgcataccatctggatatgcacttggttatgtttacggaggcttg
gtgggaactactctcagttggcgtgctgcattttggggggagggaattctgatgcttcca
tttgctattctaggatttgttatgaagcctttgcggatgaaaggttttaagcatgatgaa
tcaattgaagcattgactgtgcaggagacggctgtctcagaagttcaaggtgctttggac
cccaaggatagggcagtttcaatgaaggaagatgtaacaaattctaccatacacagacct
tccaagccaaaaattgcaacaaaaataaagaatcatctttcaaggtttatgaaagatatg
aaggatcttttggtcgataaggtttatgttgttaatgttcttggttatgtagcatacaac
tttgtaattggttcgtactcatattgggggcctaaggctggttataatatctatcatatg
actaatgcagatatgatttttggaggtattacaattgtgtgtggaatagtgggaacacta
gcaggaggctttcttctggatttcatgtctaacactatgtccaatgctttcaagcttctt
tcaacagcaacgctttttggggcaatattatgctttggtgccttttgcttgaagaacatg
tatggtttcctagctctttttgcagttgggcaactacttctctttgcaactcagggtcct
gtaaattttgtttgtctccattgtgttaaacctagtttgaggccactatctatggccatt
tctactgttgcaattcacatatttggagatgtgccttcctcacctcttgttggagttgtc
caggatcacatccagaattggaggtcaactgctcttattctaacatccgttttgattcct
gcagcggccatatggtttacagcaattttcatggacagcgtggatagatatgacgaagaa
agtgatgatgaagaaagtgatgatgagatagaaacaactgaaatgccgtcgcttgaagag
aagaagacagagaaaacaactgaatctgctgctcaacctgtcacatattcaactgttgtc
tag
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