KEGG   Rosa chinensis (China rose): 112173600
Entry
112173600         CDS       T06020                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112173600
Enzymes [BR:rcn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112173600
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112173600
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-rbx1 CR_prot_dom_plant Prok-RING_4 Rtf2 zf-ANAPC11 zf-RING_4 PRIMA1 zf-Nse zf-RING_10 Zn_ribbon_6 Sina_RING TerY_C RING_XB3-XBAT31 LIM TRAF3_RING eIF-3c_N zf-RING_11 Zn_ribbon_RlmA
Other DBs
NCBI-GeneID: 112173600
NCBI-ProteinID: XP_024167047
LinkDB
Position
6:complement(47475621..47479361)
AA seq 211 aa
MSTRMARGPSARTGLRRRKNELDLNSTPPGENRNQEGTSAQVLPQVERPSQPPLVIDLEA
IDDDVVISSPRAIAEAENNSRRNRRRPVVDLESELPRVTRQKRRRVEPNQTIINCELYIN
LDGNSNSNSKNERAMQPPLPPPPPPPPPPKEPTFTCPICMTPLAEEMSTKCGHIFCKKCI
KAAITAQGKCPTCRRKVTAKELIRVFLPTSS
NT seq 636 nt   +upstreamnt  +downstreamnt
atgagcactcggatggcaaggggcccttctgcaagaactggtctcaggcgaaggaagaat
gaattagatctcaatagtacaccacctggtgagaatcggaatcaagagggaacttcagct
caggtgttacctcaggttgagagacctagccagcccccattggtgattgatcttgaggct
attgatgatgatgttgtcatatcttcccccagggctattgctgaagctgaaaacaactcc
agaaggaaccgaaggaggcctgtggttgatttggaatcagaactgcctagggtcactcgt
caaaagcgcagaagagttgagccaaatcaaacaatcattaattgcgaactttacataaac
ttggatggcaatagcaactccaattcaaagaatgagcgggctatgcagccaccactgccg
ccgccgccgccaccgccgccaccgccaaaggagcccacctttacctgtcccatttgcatg
actccgttggctgaggagatgtcaacaaaatgtggtcacattttctgtaagaagtgcatt
aaggctgcgataactgcacagggaaaatgccctacctgtcggagaaaagtaactgcgaaa
gagctcattagggtattccttcctacttcctcctga

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