Rosa chinensis (China rose): 112173743
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Entry
112173743 CDS
T06020
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic isoform X1
KO
K02945
small subunit ribosomal protein S1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
112173743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rcn03011
]
112173743
Ribosome [BR:
rcn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
112173743
Bacteria
112173743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
112173743
NCBI-ProteinID:
XP_024167195
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Position
6:complement(35070678..35076852)
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AA seq
509 aa
AA seq
DB search
MLLLVHPCKSLSFPDSPPPLNTFHTLRPTIPNYSTPKPPIHTSFGFPTRLVISKIFPLRR
SSAITFCSRNDVFDVFPSTHKANGVEMEENEELELLNKPSPVPMDNGSASEVDKESVKNE
ALAPFLKFFTPRDSVEEVEEKGGDEVQVFEEKSEVDDENEEVEKVSVEYYEPKPGDFVVG
VVVSGNENKLDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDTSYGAEEFMVRGKMGIVKS
EAVRGAPMPGKPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRIAWHRVRQIKQLNEPIS
VRITEWNTGGLLTRVEGLRAFLPKAELMSRVNNFTELKENVGCQMYVQITRIDEAKNDLV
LSEREAWEMLNLREGTLLEGTVKKIFPYGAQVRIGETNRSGLLHISNITRARITSVGDLL
SVNEKIKVLVVKSMFPDKISLSIADLESEPGLFVSNKEKFFSEAELMAKKYRQKLPAVLS
RRSESPQGNSLPFDRLNMYANWKWFKFEK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctactccttgtccacccctgtaagtctctctcttttcccgactcaccaccaccgctt
aacaccttccacacactaagaccaaccatcccaaattactcaactccaaaacctccaatt
catacctcatttgggtttcctacaagactcgtaatttccaagatttttccacttcggaga
agttcggccatcacgttttgctctaggaatgatgttttcgatgtttttccgagtacccat
aaggcgaacggggtggaaatggaagaaaacgaggagcttgagttgctaaacaagccttcc
ccagttcctatggataatgggtctgcttcagaagtagataaagaatcggtaaaaaacgag
gctttagcgccgtttttgaagtttttcacgccaagagattctgtggaggaagtagaagaa
aagggaggtgatgaagtacaagtgtttgaggagaaaagtgaagtggatgatgaaaatgag
gaggttgagaaggttagtgtcgagtactatgaaccgaaaccgggtgattttgtggttggt
gttgttgtgtcgggtaatgagaataagcttgatgtgaatgttggggcagacttactaggt
acaatgttgactaaggaggtgttacctttgtatgacaaggagatggaatacttgctttgt
gatacaagttatggtgccgaggaatttatggttcgagggaagatgggaattgtcaagagt
gaagctgtgagaggggcaccaatgccggggaagcctgttgtggaaactggaactattttg
tttgctgaggttcttgggagaacgctcagcggtcggcccttgctttcgacaaggcggctc
ttccgcaggattgcttggcaccgagtgaggcagataaagcaactcaatgaacctatcagc
gttagaattacagaatggaatactggaggccttcttacgagagttgagggtttgcgagct
ttccttccaaaagctgagttaatgagcagagtgaacaactttacggagctgaaagagaac
gtgggatgccagatgtatgtgcagatcactcgaatagacgaagccaagaatgacttagta
ttgagtgaaagggaagcttgggaaatgttaaaccttagagagggaacactattagaaggg
actgttaagaaaatttttccttatggagcccaagtcaggataggtgaaactaacagaagt
ggcctgctgcatatctcaaacatcactcgtgctcgaattacttctgttggtgacctactt
tctgttaatgagaagatcaaagttctagtggtgaagtcgatgtttcctgataaaatatct
ctcagcattgcagaccttgagagcgagcctggcctctttgtatcaaacaaagagaaattt
ttttcagaggctgaattgatggcaaaaaagtataggcaaaagctgcctgctgttctatct
cgtaggtcagaatcccctcaaggcaattctctaccttttgatagactaaacatgtatgca
aattggaagtggttcaaatttgaaaagtaa
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