KEGG   Rosa chinensis (China rose): 112173865
Entry
112173865         CDS       T06020                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03083  Polycomb repressive complex
rcn04120  Ubiquitin mediated proteolysis
rcn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112173865
   04120 Ubiquitin mediated proteolysis
    112173865
  09126 Chromosome
   03083 Polycomb repressive complex
    112173865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112173865
   04121 Ubiquitin system [BR:rcn04121]
    112173865
   03036 Chromosome and associated proteins [BR:rcn03036]
    112173865
Membrane trafficking [BR:rcn04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    112173865
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     112173865
   Cul7 complex
     112173865
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     112173865
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     112173865
SSDB
Motif
Pfam: Skp1 Skp1_POZ Myb_DNA-binding DUF3140 Myb_DNA-binding_7
Other DBs
NCBI-GeneID: 112173865
NCBI-ProteinID: XP_024167315
LinkDB
Position
6:67237..68188
AA seq 162 aa
MSTEIGNKKLTLTSCDGDDFQIREAVALESQTIKHMVEDGCADNAIPLPNVTGAILAKVI
EYCKRHVEDKESKNEDNKNDQEESLKKFDADFVDVDQGVLFDLILAANYLNIKGLLDLTC
QTVADMIKGKTPEQIREKFNIKNDFTPQEEEEVRRENAWAFD
NT seq 489 nt   +upstreamnt  +downstreamnt
atgtcgactgaaattgggaacaagaagctaaccctgaccagctgcgacggagatgatttc
cagattagagaggcggttgcccttgaatcgcagaccatcaagcacatggtggaggacggc
tgcgccgataatgcgatccccttgcccaacgtcaccggcgccatcctagccaaggtcatc
gagtactgcaagaggcacgttgaggacaaggaaagcaagaatgaagacaataagaatgat
caggaggagtctctcaagaaattcgacgccgatttcgtggacgtcgaccagggcgtcctg
ttcgatctgatattggcagcaaactatctgaacatcaaggggctgctggacttgacatgc
cagactgtggcagacatgataaagggaaagactcccgaacaaattcgcgagaaattcaac
atcaagaatgacttcactcctcaggaagaagaggaggttcgaagggagaacgcatgggct
tttgactga

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