Rosa chinensis (China rose): 112173942
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Entry
112173942 CDS
T06020
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112173942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112173942
04121 Ubiquitin system [BR:
rcn04121
]
112173942
03036 Chromosome and associated proteins [BR:
rcn03036
]
112173942
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112173942
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112173942
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
112173942
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112173942
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
112173942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-RING_6
PTCB-BRCT
zf-C3HC4_4
PHD_NSD
RTT107_BRCT_5
Prok-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
112173942
NCBI-ProteinID:
XP_024167401
LinkDB
All DBs
Position
6:complement(50610516..50616547)
Genome browser
AA seq
712 aa
AA seq
DB search
MAQSSAKHSSDSGNCRNGVVSPMNKNPLTFHLQKLGLELTCPLCLGFFNRPTLLPCNHIF
CNNCVPNGTNLGAECPLCNIQVPGQDLRHAPFMESIVAIYKSMKATYCTNSSQPIYSDVR
TASGQNPVSPDVSFAGKSTKELFDNCQEGKSESAQTIVSSRGNKRVWVPCSQKHSVTDGI
GKHGKVDNCSIAIDGNSEEFELGRGRKFNGGLNPNSPLPSSQIRSVGLDECMTSERDMNP
VVQALLDSPPSFGDAKCSDNDNSFDQCSEQISDSLIRGSMRKIDDRTGQMRPDSSASDTD
GHLRELKRQKKLDYGPVSGTNSELELKFRTPSNESFTNNTICAFCQSSTISEVTGPMLHY
SKGKLVEGDDAAVSDVIHVHKICIDWAPQVFFKDETIKNLKAEVTRGARLKCTKCGIKGA
ALGCFVKSCRRSYHVTCAIEISKCRWDYESFLLLCPAHCSVKFPNEKLNRNKHKNCQLSD
SRVASNGVNNWVLCPSGLSSEEKIFLIKFAEMNGATLSKSWTPDVTHVIAALDGDGAYVR
TFKIFMAILAGKWIVTIDWVKACVETKHHVDEEPYEVSLDNYGCRSGAKAGRLRALSNDA
KLFNGLNFYFAGDFILERKEDYKELVIAAGGTVFNSKEDVLEASCHEKGTSRTLVVYNLD
PPPGCKLGEEVSILWQRSNEAQDIAAKIGAEYVFHTWLLESIARYELQPIVC
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcctccgccaagcactcttcagattccggaaactgccgcaacggcgtcgtt
tcgccgatgaacaagaaccccctcacgtttcatctccagaagctcggcctcgagctcact
tgccctctctgcctagggttttttaatcggccgacattgcttccctgcaatcacatcttc
tgcaacaactgtgtgcccaatgggaccaatttgggagcagagtgtcctctgtgtaatatc
caagttcctggtcaagatctgaggcatgcgcctttcatggaaagcatagtagcaatctac
aaaagcatgaaggccacttactgtaccaactcctcccagcctatatattcagatgttaga
acagcttcgggtcaaaacccggtttcacctgatgtcagttttgctgggaaatcgactaaa
gaactgtttgacaattgccaagagggtaaatcagaaagtgctcagaccattgtttcatca
aggggtaataagcgagtatgggttccatgtagtcagaaacattctgttacagatggaatt
ggcaagcatggcaaagtagataactgtagcatagcaatagatggtaacagcgaagaattc
gagttgggtagaggacgtaaatttaatggtggattaaatcccaattcaccattaccaagt
tctcaaataagatctgtgggactggacgagtgtatgacttcagaaagagacatgaatcca
gtagtgcaggcgttgctggatagtcctccttcatttggtgatgccaaatgttcagataat
gataatagctttgaccagtgctctgagcaaatttcagacagtttgatcagggggtcaatg
aggaaaattgatgatagaacagggcagatgaggcctgatagttctgcatctgatactgat
ggccatttgagggaactcaagagacagaagaaactggactatgggccagtctcagggact
aattctgagctggaacttaaattcagaacaccttctaatgagtctttcacaaataacacc
atttgtgcattttgccagtcttccacaatctcagaggtcactgggccaatgttgcactat
tccaagggaaaattggtggagggagatgatgcagctgtttcagatgtcatacatgttcac
aaaatatgcattgattgggcaccacaagtgttctttaaagatgaaaccattaaaaatttg
aaggcggaagtgacaaggggtgcaagattaaaatgcaccaaatgtgggataaagggagca
gccttgggatgctttgtgaaatcctgccgaagaagctatcatgttacctgtgcaattgaa
atttccaagtgccgttgggattatgaaagctttcttctgctgtgtccagcacattgttca
gttaaatttcccaatgagaagttgaatcgtaacaagcacaaaaattgtcagctctccgac
agtagagtcgcttcaaatggagtgaacaactgggttttatgcccttctggtttgtcttct
gaagagaagatttttcttatcaaatttgctgagatgaatggtgcaactttgtccaagagc
tggacacctgatgttacacatgtgattgctgccctggatggggatggtgcatatgtccgg
acgtttaaaattttcatggccattttggcaggaaaatggatagtgacaattgactgggta
aaagcatgtgtggaaactaagcatcatgtggatgaagaaccttatgaagttagtcttgat
aactatggttgtcgcagtggtgccaaagctggcaggcttagggcattaagcaatgatgcg
aagctctttaatggtttgaatttctattttgctggtgattttatactggaacggaaggaa
gactacaaagaattggtcatagctgcaggaggtactgttttcaacagtaaggaagatgtg
cttgaagcaagttgtcatgaaaagggcacttcgaggacactagttgtgtacaaccttgac
cccccaccagggtgcaagttgggggaagaagtttcaatactttggcaaaggtctaacgag
gcacaagatatagctgcgaaaattggagctgaatacgtctttcacacatggttgttggag
tcaattgcgagatatgagttgcagccaattgtatgttga
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integrated database retrieval system
