Rosa chinensis (China rose): 112174170
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Entry
112174170 CDS
T06020
Name
(RefSeq) 25.3 kDa vesicle transport protein-like
KO
K08517
vesicle transport protein SEC22
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04130
SNARE interactions in vesicular transport
rcn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112174170
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112174170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112174170
Membrane trafficking [BR:
rcn04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
112174170
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
112174170
NCBI-ProteinID:
XP_024167670
LinkDB
All DBs
Position
6:complement(30964700..30969183)
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AA seq
136 aa
AA seq
DB search
MSFHFSSMMFMFCISIPNNTGFLFFSVYGYVINGCMTLQVNNFVRLSVGSFSTCKTIYAF
IKFDTFIQRTKKLYQDTCTQRTISKLNNELYEVHQIMTCNVQEVLGVGEKLDYKARDLNQ
QALISKWAPVAMLCRC
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcatttcagttcaatgatgtttatgttctgtatttcaataccaaataatact
ggttttcttttcttttctgtgtatggatatgtgatcaatggatgtatgacgctgcaagtt
aataatttcgtcaggctttcagtagggagctttagcacctgcaagaccatatatgctttt
attaaattcgatacattcatacagagaaccaagaaattgtaccaggacacttgtactcag
cgaactatttcaaagttgaataatgaactctatgaagtccaccaaataatgacttgcaat
gttcaggaagttcttggcgtcggtgaaaagttggactataaggcaagagacttgaatcaa
caggctctgatcagtaagtgggctcctgttgccatgctctgcaggtgctaa
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