Rosa chinensis (China rose): 112174173
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Entry
112174173 CDS
T06020
Name
(RefSeq) chaperonin CPN60-1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112174173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112174173
03110 Chaperones and folding catalysts [BR:
rcn03110
]
112174173
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112174173
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112174173
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112174173
Messenger RNA biogenesis [BR:
rcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112174173
Chaperones and folding catalysts [BR:
rcn03110
]
Heat shock proteins
HSP60 / Chaperonin
112174173
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112174173
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112174173
Exosomal proteins of other body fluids (saliva and urine)
112174173
Exosomal proteins of breast cancer cells
112174173
Exosomal proteins of colorectal cancer cells
112174173
Exosomal proteins of bladder cancer cells
112174173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
112174173
NCBI-ProteinID:
XP_024167672
LinkDB
All DBs
Position
6:complement(48862017..48866565)
Genome browser
AA seq
576 aa
AA seq
DB search
MYRFATNLASKARLAKNSGQQIGSRISWRRNYAAKDIKFGVEARSLMLRGVEELADAVKV
TMGPKGRNVVLEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDAAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDCVVTNLKSRARMISTSEEIAQVGT
ISANGDREIGELIAKAMEKVGKEGVITISDGKTLDNELEVVEGMKLDRGYISPYFITNQK
NQKCELDDPLVLIYEKKISNLNAVVKILELALKKQRPLLIVAEDFESEALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAILTGGEVITEELGLNLEKVGPEMLGTCKRITVSKDD
TVILDGAGDKKAIEERCEQLRSSIELSTSDYDKEKLQERLAKISGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGAALLYASKELDKLQTANFDQKIGVQIIQNALKM
PVSTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVVSLPEKEGPAVGAGMGGMGGMDY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcttcgccactaacctcgcctccaaagccaggttggctaagaacagtggccag
cagattggcagcagaataagttggagaaggaactatgcggccaaggatattaaattcggt
gtggaagcccgatcgttgatgcttaggggtgtggaagagcttgccgatgctgttaaagtc
acaatggggccaaaaggacgcaatgttgtcctggagcaaagctttggagctcccaaagtg
acaaaggatggtgtgactgtagcaaagagcattgagttcaaagacaaagtcaaaaacatt
ggtgctagtcttgtaaagcaggtggcaaatgctacaaatgatgctgcgggcgatggtacc
acttgtgctacagttctcacccgtgccatatttaccgaaggatgcaagtcagtggcagct
ggaatgaatgctatggacctaagacgaggcatcacaatggcagttgattgtgttgtgaca
aacttgaagagcagggctcggatgatcagtacatcagaggaaatagctcaggttggcaca
atatcagctaatggtgacagagagattggtgagctaatagctaaggctatggagaaagtt
ggtaaagaaggtgttatcaccatatctgatggaaaaacactcgacaatgaattggaggtt
gttgaaggaatgaagctggacaggggttatatatccccttattttatcaccaatcagaag
aaccaaaaatgtgaattggacgatccacttgtcttaatctacgagaagaaaatctcaaat
ctaaatgctgtagtgaaaatattagagctggcattgaagaaacaaaggcctctgctgatt
gttgctgaagattttgaaagtgaagcacttgctacactcattttaaacaagcttcgtgct
ggaattaaggtctgtgcaattaaagcccctggattcggagagaacaggaaggcaaatctg
caggacctagccattcttactggaggcgaggtgataactgaagagcttggtctgaacctc
gaaaaagtgggaccagagatgcttggcacatgcaaaaggattacagtttccaaagatgat
actgttattcttgatggggctggtgacaagaaagctattgaagaaagatgtgaacagtta
agatcatcaattgaattgagcacttctgattacgacaaggagaagctacaagagcggctg
gcaaagatttctggtggtgttgctgttctaaagattggcggagctagtgaagcagaagtc
ggtgaaaagaaggatagggttactgatgctctgaatgccactaaggctgctgtagaagaa
ggaattgtacctggtggtggtgcagcacttctgtatgcctccaaagagctggacaagttg
caaactgcaaactttgatcaaaagattggtgtgcagatcattcaaaatgctcttaagatg
cctgtatccacaattgcttcgaacgctggagttgagggggcagtcgttgtcggcaagctg
ttggagcaggacaatcctgaccttggatatgatgcagcaaagggtgaatatgtagacatg
ataaaggccgggatcattgatcccttgaaagtcatcagaactgccttggtagatgctgca
agtgtctcctcgttaatgactaccaccgaggcagttgttgtctcgcttcctgagaaggaa
ggccctgcagtgggagctggtatgggaggaatgggaggcatggattactag
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