Rosa chinensis (China rose): 112174177
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Entry
112174177 CDS
T06020
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112174177
Transcription machinery [BR:
rcn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
112174177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
112174177
NCBI-ProteinID:
XP_024167676
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All DBs
Position
6:complement(65373350..65376889)
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AA seq
545 aa
AA seq
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MGLGFRLNLKCGFPIHNSHWQTNSPSKLSSTSVRGREGSFSSARLSFLSVISEECETSNK
DSFRVYTCPSASPQLLDDGYSEVEEKMNIRGMSNSGSPNMIDDKEHSFISSAGLRTSHFS
LLLQNLNVLEETFADSDVSKLEKEILLQLGRLGALKLFDICLSRTLKTSSFLDLSDIPTE
PIEEHKMERMNIVRSGKREERKLRKRTSDDSKKFTGSLPLKSMKEGFKKPTPSSFRRASN
SRSRRLLLAKNEAEMSVGVKVIADLERLKATLEKETGKVPTLRCWAEAAGVDEKVLQQKL
HFGWYCQDELVRSSRSLVLYLARNYRGLGVALDDLLQAGNLGLLQGAERFDPSQGYRFST
YVQYWIRKSMSRLLAQHARGIKIPNTLSKAINRIQKARKANYSSHMKYPDDEEIAKITGL
SLAKIRSASRCLRVVGSVDHKIWECSAGTYMEFTPDIAVESPDEPVMRQHMKNDIHDLLE
GLNSREKQVLALRYGLNYCNPKSLEEIGRLFHVSKEWIRKIEKNALTKLRDEETNKNLSH
YLKQW
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgggtttcaggctgaacctcaagtgtggttttccaattcataattctcattgg
cagaccaattctccttccaagctttcttcaacttctgttagaggcagggagggctctttc
agttctgcaaggctgtcctttttgtctgttatttctgaggaatgtgagacttctaataaa
gattcttttagagtgtacacgtgtccatctgcatccccacaactcttagatgatggttac
tcagaagtggaagagaagatgaacattagggggatgtccaacagtggctcacctaacatg
attgatgataaagagcacagctttatatccagtgcagggttaagaacatctcattttagc
ttgttactgcaaaatcttaatgttttggaggagacttttgctgattcagatgtgtcaaag
ttggaaaaggagatccttttgcaattaggaaggcttggagctctgaagttatttgatatt
tgtctatcgagaacccttaaaacctcgagctttttggatttatcagacatacctactgag
ccgattgaagagcataagatggaaaggatgaatattgtccgttctggcaaaagggaagaa
cgaaaattaaggaaaagaacatcagatgattccaaaaagtttactggttccttgccttta
aaatcaatgaaggaaggttttaaaaagcctactccttcatcatttagaagagcatcgaat
tctagaagtcgaagactattgttggctaaaaatgaggcagaaatgtcagtcggagttaag
gtgatcgctgacttggagaggcttaaagcaacattggagaaggaaactggtaaagtaccg
accttaagatgctgggcagaagcagctggagtcgatgaaaaggtgctgcaacaaaaattg
catttcggttggtattgccaagatgagcttgtaaggagcagtcggtccttggttctatac
cttgctcgaaactatagaggacttggagtagccttggatgatttgctgcaggctggaaac
ctgggactcctacaaggtgcagaaagatttgatccctcgcagggttacagattctcgacc
tatgtccaatactggataagaaaatcaatgtcaagattgctggcacaacatgccagaggg
atcaaaattcctaacacactaagtaaagcaataaatcggatacagaaggctcgaaaagcc
aattacagcagccacatgaaatacccagatgatgaagaaattgcaaagattacaggtctt
tctttggcgaaaatcagatcggccagcaggtgtctgagagttgtgggttcagtagatcat
aagatatgggaatgctcagctgggacgtatatggagtttactccagatatagcggtagag
agtcctgacgaacctgtcatgcggcaacacatgaagaacgatattcatgatctgctggaa
ggcttgaattctagagagaagcaagttttggcactacgatatggtctaaactactgcaac
cccaagtcacttgaggagattggaaggcttttccatgtgagcaaggagtggatacgaaag
atagaaaagaatgctctgaccaagctgagggatgaagaaaccaacaaaaacttgagccat
tatttgaagcagtggtaa
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