Rosa chinensis (China rose): 112174223
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Entry
112174223 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: protein HIRA-like
KO
K11293
protein HIRA/HIR1
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112174223
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112174223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
PutA_N
Motif
Other DBs
NCBI-GeneID:
112174223
NCBI-ProteinID:
XP_024167732
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All DBs
Position
1:complement(5287060..5294023)
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AA seq
1047 aa
AA seq
DB search
MIAEKPSWIRHEGLQIFSIDVQPGGLRVATGGGDHKVRVWNMKSLGRDFSNEESAQRLLA
TLRDHFGSVNCVRWAKHGRYLASGSDDQVLLIHERKPGSGTTEFGSGEXPDVENWKVAMT
LRGHTADVVDLNWSPDDSMLASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHKTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMFKRNFSNAQEGKAAPVGWTNGTSKIGG
KEKELQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLD
GSVATFHFEVKELGHRLSDAELDELKRSRYGDVRGRQVHLAESPAQLLLEAASAKQAPKK
KVVRDVQQSQTVKPSAGVVVATKASDGHVDDRKKSGGASGDVLNKVSMPAHISSPVKQRE
YRRPDGRKRIIPEAVGVPLQKENNSVGAQSQALDFPLMPSDHRKNDSGLVADDRGIKENS
VRETLMRGNDIKDGQGVTARAMITNSLVIEKVPTSTGRDESINIEQSGTVKASNSICGSS
PILSIRVFDKKEAEDAVPYCLEARPKEHAANDIINVGNSLIIKETEITCTKGLQTLWSDR
ISGKVTVLAGNANFWAVGCEDGCIQVYTKCGRRAMPTMMVGSAAVFIDCDECWKLFLVTR
KGSLYLWDLLKRNCLLHDSLSSLVALNPNPSANDAGMIKVISAKLSRSGSPLVVLATRHA
FLFDMGLMCWLRVADDCFSGSNFASSWHLGLTQSGELAGLQVDVKKYLARKPGWSRVTDD
GVQTRAHLEAQLASLLALKSPNEYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMVE
ATSLDSKNLAWDPFVLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLISEYESAEINVE
SKTQTSPTARLSAADPMESAPSSKNKMDSVLVATDQAKPVPDPTDQKDSTQLATDRENSA
STAKNEVNSDPPKLNHVTHAPQNDAGS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagaaaagcccagttggattaggcatgagggtttgcaaattttctccattgat
gttcagcctggtggacttagggttgccactggtgggggtgaccacaaggtgcgggtatgg
aacatgaaatccctgggcagggatttctcaaatgaagaatcagcccaaaggctacttgca
accctccgtgatcacttcggttctgtgaattgtgttaggtgggctaagcatggtcgctat
cttgcatcaggatctgatgatcaagtacttctaattcatgagaggaagccaggttcagga
accactgagtttggcagtggagagncccctgatgtcgagaattggaaagttgcaatgact
ttgagagggcatactgcagatgtggtggatctcaattggtctccagatgactcgatgctg
gccagtggaagtttagataacactatacacatctggaatatgagcaatggtatttgcact
gctgttcttaggggccattctagcttggttaaaggagttacttgggatccgattggctcc
ttcatagcaagtcaatcagatgataagactgtaattatttggcgaacaagtgactggagt
cttgctcacaaaacagacggccactgggcaaaatcacttggatctacctttttcaggcgg
cttggatggtccccttgtggtcatttcattactaccactcatgggttccagaaaccaagg
cattcagcacctgttctagagagaggggaatggtctgctacttttgacttcttaggacat
aatgcacctgtgattgtggtgaagtttaaccactcaatgtttaagaggaatttttccaat
gctcaagaagggaaagctgcacctgttgggtggaccaatggcacctcaaaaataggtggg
aaagaaaaagaactacaaccttataatgttatagcaatcgggagtcaggatcgtacaata
actgtatggacgactgcaagtccccgccctctctttgtagcaaagcatttcttcactcaa
agtgttgtggatttatcttggagccccgatggttattcactttttgcatgttctttggat
ggttcagtggctactttccattttgaggtgaaagagcttggccaccggttaagtgatgct
gaactggatgaattaaagagaagtcgttatggcgatgttagaggtaggcaggtacattta
gctgaaagcccagcacagttattgcttgaggcagcttctgctaagcaagccccaaagaaa
aaagtggttcgggatgttcagcaaagccagacagtcaaaccttctgcgggtgtggtggtt
gcaacaaaagcatctgatggtcacgttgatgataggaagaagagtggaggagcttctggt
gatgttttaaataaagtttcaatgcctgcccacatttctagtcctgtaaagcaaagagaa
tatagacgacctgatggtcgaaagaggattattccagaggcagttggtgtgcctctccag
aaggaaaataattctgttggggctcagtcccaggcacttgacttccctctaatgccttct
gatcacagaaagaatgatagtgggttagttgctgatgatagggggattaaagaaaattct
gtcagggaaacacttatgagaggcaatgatataaaggatggacagggggtcaccgctaga
gctatgattaccaacagccttgttattgagaaggttcccacctccacaggtagagatgaa
agcataaatatagaacagtcaggaactgtgaaggcttctaattcaatatgtggttctagt
cctattctttcaattagggtgtttgataagaaggaagcggaagatgctgtaccatattgc
ttggaagctcggcctaaggaacatgctgcaaatgacattattaacgtgggaaattcactg
atcataaaagaaaccgaaatcacctgcacaaaagggttgcaaacactttggtctgataga
atatctgggaaagtcactgttttagctggaaatgcaaacttttgggctgttggatgtgaa
gatggatgcatccaggtttacacaaagtgtgggagacgcgctatgccgactatgatggta
ggatctgcagcagtttttatagattgtgacgagtgctggaagttgtttttggttaccaga
aaaggatccttgtatctatgggatctattaaagcggaactgtctccttcatgactcgttg
tcatctctggttgctttaaacccaaatccatctgcaaatgatgcaggcatgatcaaagtt
atatcagcaaagctatcaagatctggatctccccttgttgttctcgctactcgccatgcc
ttcctttttgacatgggactgatgtgttggcttagggttgcagatgactgcttttctggg
tcaaattttgcaagctcctggcatttgggtttgacgcagagcggtgagctggctggtttg
caggttgatgttaagaaatatttggctaggaagccaggttggagcagggtgactgatgat
ggagtacagacacgtgctcatttggaagctcagctggcttctttgctggctttaaagtcc
cctaatgaatatcgccaatgccttctatcatatatacgcttccttgccagagaagcagac
gagtctcgtctacgagaagtctgtgagagtttccttggacctcctactggaatggtggaa
gctacttctttagattcaaagaacttggcatgggatccttttgtgcttggaatgaggaaa
cataagctcttacgagaagatattctcccggcaatggcttcaaatcgaaaagtacagcgt
ttgctcaatgaattcatggatctaatttctgaatatgaaagtgctgaaataaatgtagag
tcaaaaactcaaacttcaccaacagcacgtctgtcagcagctgatccaatggagtctgct
ccatccagtaaaaataaaatggattctgtccttgtggcaactgatcaagcaaagcctgtt
cccgatccaactgatcaaaaagactccactcagttagcaacagatagagaaaattctgct
tcaacagcaaaaaatgaagttaattcagatccaccaaagctcaatcacgttactcatgcc
ccacaaaatgatgcaggttcttga
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integrated database retrieval system
