Rosa chinensis (China rose): 112174235
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Entry
112174235 CDS
T06020
Name
(RefSeq) mRNA-decapping enzyme subunit 2 isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112174235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112174235
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
112174235
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112174235
mRNA degradation factors
5'-3' decay
Decapping complex
112174235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
112174235
NCBI-ProteinID:
XP_024167744
LinkDB
All DBs
Position
6:complement(47996336..48002892)
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AA seq
334 aa
AA seq
DB search
MQIQQKRNHREATMSGLPRSSSAPLKNGLPPQELLDDLCSRFVLNVPKEDLQSFERILFL
VEYAHWFYEDNSVEKNPSLKSFNLKEFTSLLFNSCDVLKPYVAHIDDIFKDFTSYKVKVP
VTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVHEETGFDVTKLLKI
DDYIEVIFGQQRVRLYIIAGVREDTAFAPLTKKEISEIAWHRLDDLQPASDDVISRGITG
LKLYMVSPFLASLKSWIFKHQPPTAPRPDMPLRGISVWRAKNSSIGSSNMIMESQSTKPE
LDVHPPDIGPGKSFRNFRFNTAPILQAMEAGFSA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccaacagaaaagaaatcaccgggaagccaccatgtctggccttccccggtct
tcaagtgctccgctaaagaatggccttcctccccaggaactcctcgatgatctctgcagt
cggtttgttctaaacgttccaaaagaagacctacaatcatttgagaggattttatttctt
gtggagtatgctcattggttttatgaagacaactcagtggagaaaaatccatcgctgaag
tcatttaatttgaaggagtttacttctttattgtttaacagctgtgatgttcttaaacct
tatgttgcccatatagacgacatatttaaggacttcacttcttacaaggttaaggttcct
gtaactggagcaatcattttggatgaaacctatgaaaggtgcatactagtgaagggatgg
aaaggatcaagctggagttttcctcgtggcaaaaagaacaaagacgaggaagaccatgca
tgtgccatcagagaagtccatgaagaaacaggatttgatgttactaaacttcttaaaata
gatgattacattgaagttatatttggacaacaaagggtgcgactctacattattgctggt
gtaagggaagatacagcctttgcaccactcaccaaaaaggagatcagtgaaattgcatgg
catcggctggatgatcttcagccagcaagtgatgatgtgatatcccgtggtatcaccggc
ctcaagctttacatggtgtcaccttttctggcatcgttgaagtcatggatctttaaacat
cagcccccaactgctccaagacctgatatgcctctgagaggaatcagtgtgtggagagca
aaaaacagctcaatagggagtagcaacatgataatggagagccaatcaactaaacctgag
cttgatgtccatcctcctgacataggacctggcaagagcttcagaaacttcaggttcaat
actgctccaatcttacaagcaatggaagctggtttctctgcttga
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