Rosa chinensis (China rose): 112174323
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Entry
112174323 CDS
T06020
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00300
Lysine biosynthesis
rcn00470
D-Amino acid metabolism
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
rcn01230
Biosynthesis of amino acids
Module
rcn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
112174323
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
112174323
Enzymes [BR:
rcn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
112174323
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
112174323
NCBI-ProteinID:
XP_024167834
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All DBs
Position
6:complement(21563429..21567780)
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AA seq
486 aa
AA seq
DB search
MAAAQLTFNPPSSFSKPLNHSLPRNPFSQNPILPFKPSLKPFVLKAVLSQNPSKSLTQDP
QTVPFKHCFSKSSDGFLYCEGLKVQDVMDSVEKRPFYLYSKPQITRNVEAYKEALEGLRS
VIGYAIKANNNFKILEHLRGLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKLLDDLVL
AAQEGVFINVDSEFDLENIIRAARIAGKRVNILLRINPDVDPQVHPYVSTGNKNSKFGIR
NEKLQWFLDEVKKHPDELKLVGAHCHLGSTITKVDIFRDAAVLMVEYLDKIRDQGFDVNY
LNIGGGLGIDYYHTGAVLPTPRDLINTVREVVLSRDLNLIIEPGRSLIANSCCLVNRVTG
VKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPAPHEAEISTFDVVGPVCESADFLG
KERELPTPPKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEENGSVSKIRHAETFEDHM
RFFEGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgcagcttaccttcaaccctccatcctccttctccaaacccctaaaccac
tctctcccccgaaacccattttcccaaaaccccattctacccttcaaaccctcccttaaa
cccttcgttctcaaagccgtgctctcccaaaacccttccaaatccctaacccaggaccct
caaacggtgccgtttaagcactgcttctccaaatcctctgatgggtttctctactgtgag
ggcctcaaggtccaggacgtcatggattcggtggagaagcgccctttctacctctacagc
aagcctcagatcaccagaaatgttgaggcctataaggaggccttggagggtttaaggtct
gttattgggtatgccattaaagccaacaataacttcaagattttggagcatttgagggga
ttaggctgtggtgctgtgctcgtcagtgggaacgagctcaggttggctcttcgagctggg
tttgacccaactaggtgtattttcaatgggaatggaaagttgttggatgacttggttttg
gctgctcaagaaggtgtttttatcaatgtcgatagtgagttcgacttggaaaatattatt
agagctgcgagaattgctggcaagagggtcaatattctacttcgaattaacccagatgta
gaccctcaggttcatccttatgtttccactggtaacaagaattccaaatttggtattaga
aatgagaagctgcaatggtttttggatgaggtgaagaaacatcctgatgagctaaaactt
gttggggcccattgccatcttggatccaccattacaaaggtggatatatttcgagatgct
gcagttcttatggtcgagtaccttgacaaaatccgagatcaaggttttgatgttaattac
ttaaacattggtggtggccttgggatagattactatcacactggtgctgttcttccaaca
cccagagatctcattaatactgtccgggaggtggtcctatcacgagatctaaatcttatc
attgaacccggaagatcacttattgcaaattcttgctgtttggtcaaccgagtaactggg
gtgaaaacaaatggcaccaaaaactttattgtgatcgatggaagcatggctgaactcatt
cgtcccagtctctatgatgcttatcaacatattgaactagtttctcctgcaccacatgaa
gctgagatttctacttttgatgtggttggccctgtctgcgagtctgcagattttttaggg
aaggagagagaacttcctactcctccaaagggagctggtctggttgttcatgatgcaggt
gcttactgcatgagcatggcctcgacttacaatcttaaaatgcgccctccggaatattgg
gtggaagaaaatggatcagtttcaaagatcaggcatgcagagacattcgaagatcatatg
agattctttgagggtctttga
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