Rosa chinensis (China rose): 112174517
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Entry
112174517 CDS
T06020
Name
(RefSeq) isoamylase 2, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00500
Starch and sucrose metabolism
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112174517
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
112174517
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
Motif
Other DBs
NCBI-GeneID:
112174517
NCBI-ProteinID:
XP_024168065
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Position
6:54662765..54666309
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AA seq
870 aa
AA seq
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MAMLPLSITLQACCWACGTTESSKLTATTHYRDRNKTTLGLVKLDAERKLVFGGFVQSFT
QSLPRGCHSRVQATSGVSIEPMEQKFTTGTEETDKVSTYLFRTENGDLVNVFVRNNTVNY
SVYVEVSSLQLSSSADRLVLSWGMYRADSSSLMPSDFIETPFIETSSGSFTLELEFEAKQ
TPFYLSFIVKSLADANLSGLEIRSHRKTNFCVPVGFGRGYPTPLGLSFSSDGSINFAIFS
RNAESVVLCLDDDPTAQKPALELDLDPYVNRSGDIWHVSFESAWTFVSYGYRFKGTLLRN
TNSFDEGDILLDPYAKVIDESIPNNKGTGSKLVGRLCEEPVFDWDGDVRPHLPIEKLMVY
RLNLTRFTEHKSSKLPTNVAGTFSGLTEKLDQFKDLGVNAILLEPIFPFDEEKGPYFPCH
FFSPMNCFGPSGGPIATINSMKEMVKEFHANGIEVLLEVVFTHTAAGEVLQGIDTSSYYH
ASTAKDLEARNSLNCNHPIVQQMVLDSLRYWVTEFHVDGFCFINASSLLRGVNGEYQSRP
PLVEAIAFDPLLTKTKFIADCWDPHEMVPKETRFPHWKRWAEVNARFCNDVRNFLRGEGL
LSDLATRLCGNGDIFSDGRGPAFSFNFISRNSGLPLVDLVSFSGSELASELSWNCGEEGP
TSKTAVLERRLKQIRNFLFILYLSLGVPVLNMGDECGQSSGGSPAYSDRKSFDWNAMETG
FATQTRQFIAYLSSFRRRRSDLLQKKHYFKEENIDWYGSDQSLPRWEDPLCKFLAMRLKA
DQDEVENQLTNEYADLRGDLFVAFSAAEQSETVILPPPPEGMAWRRLVDTALPFPGFFSI
DGEPIIEQMEGLFSYAMKSHSCALFEARRL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgctaccgctgtcaatcacactacaggcctgttgttgggcctgtggaaccact
gaatcgtctaagctgacagccactactcattatagagacagaaacaaaactacgctcggt
ttggtaaaattggacgcggagagaaagctagtttttggaggatttgtgcagagtttcaca
caaagtttgccgcggggttgtcactccagagtgcaagctacatcaggagtttctattgaa
ccaatggagcagaagtttaccactggtactgaagaaacggataaggtatcaacttatcta
tttaggacagaaaatggggatctggtgaatgtgtttgttagaaataatactgtcaactac
agtgtgtatgttgaagtttcatcattacaattgtccagcagtgctgacaggctagtcctc
agttggggcatgtatagagctgattcatccagtctcatgccttcagactttatcgaaacc
ccatttatagagacttcttcgggcagttttactcttgaattggagtttgaggctaaacaa
acccctttctatctctcatttattgtgaaatctctggcagatgcaaatttgagtggtttg
gaaataagaagccataggaagacaaatttctgtgtcccagttggtttcggtcgaggttat
cctactccattgggtctttccttttctagtgatggttccataaactttgccattttttcg
agaaatgcagaaagtgtggttttatgcttggacgatgaccccactgctcagaagcctgct
ctggagcttgatctagatccatatgtcaatcgatcaggtgacatatggcatgtgtcattt
gaaagtgcatggacttttgtgagctatggctacagatttaaggggacccttctgagaaac
acaaatagcttcgatgaaggggatattcttctggatccatatgctaaggtcattgatgaa
tctatccctaataataaaggaacagggtcgaagttagttggaagactatgtgaggaacct
gtgtttgactgggatggtgatgttcgacctcacctgccaatagagaaactgatggtttat
cggttgaacctgacacgttttactgagcacaagtctagtaagctacctactaatgtagca
ggtacgttttctggtttgacagaaaagttggatcaatttaaagatttgggtgtgaatgca
attttgttagagccaattttcccatttgatgaggaaaaaggtccatatttcccttgccat
tttttttcaccaatgaattgttttggaccatctgggggccctatagcaactatcaactcg
atgaaagagatggtgaaagagtttcatgccaatggaatagaggtcctactggaagttgtt
ttcacccatactgctgcgggtgaagtgctgcaaggaatcgacacctcatcttattatcat
gcaagtacagctaaggatttggaagcaagaaattctttgaattgtaaccatcccattgtg
cagcaaatggtattagatagtcttcgatactgggtgactgagtttcacgtcgatggtttt
tgtttcataaatgcatcatctctgttacgtggggttaacggtgaataccaatctcgccca
cctttggttgaagcaattgcttttgatccactactgacaaagaccaagttcattgcagac
tgctgggaccctcatgaaatggtaccaaaggaaactcgttttcctcattggaagagatgg
gcagaagtgaatgcaagattctgcaatgatgtaagaaactttttgaggggtgagggtctt
cttagtgaccttgctacacggctttgtgggaacggggacatcttttcagatgggcgaggc
ccagcattctctttcaattttatttccagaaattctggtcttcctcttgtggaccttgtt
agtttcagtggcagtgagttagcttcagaactgagttggaattgtggggaagaagggcct
acaagtaaaactgctgtactagaaagacgccttaaacaaatccgtaattttctgtttatc
ttgtatctttcattgggagtccctgttcttaacatgggagacgagtgtggacaatcttca
ggtggttcccctgcatacagtgacagaaaatctttcgactggaatgcaatggaaacaggt
tttgctactcaaaccagacaatttattgcatatttaagttcattcaggaggaggcggagt
gatcttcttcagaagaagcactacttcaaagaagaaaatattgactggtatgggagtgac
caatcgttaccgaggtgggaagaccctctgtgcaaattccttgccatgaggttgaaggca
gaccaagatgaagtggagaaccaattgaccaacgaatatgctgatttaaggggtgacttg
tttgtagccttcagtgcagctgaacagtcggagactgttattctacctccacccccagaa
ggtatggcatggagacgtttggttgacacggctctcccatttccgggatttttctcaatt
gatggtgagcctatcattgagcaaatggagggtttattttcttatgccatgaagtctcac
agttgtgctctttttgaagccagaagattgtag
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