Rosa chinensis (China rose): 112174762
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Entry
112174762 CDS
T06020
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112174762
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
LRR_R13L1-DRL21
LRR_4
LRR_8
AAA_16
AAA_22
AAA_14
ATPase_2
Zeta_toxin
NPHP3_N
RNA12
AAA_33
UPF0261
Motif
Other DBs
NCBI-GeneID:
112174762
NCBI-ProteinID:
XP_024168325
LinkDB
All DBs
Position
1:complement(40763270..40766343)
Genome browser
AA seq
930 aa
AA seq
DB search
MALPTTDLLIGKIVAIVENEALSISSVRDEIDEIKQELVSMKSFLQDADGKKENSEGEET
WVASVRDLAYDVEDIIDEFMYHIYEKQTGGLFPRWLHKIIHIPRSLWYKRQIANKLQKTT
KMIKAIPERNQRYAIGGVEGTTSSIDVDKWVQNQAESSLFIKEDELVGIEGNKQTIMGWL
MDEEQHQTIVSVVGMGGSGKTTLVAKTFTNESVKRHFDCYAWITVSRTYAIEDLFRCLIK
EFHQSRKEKVPAPAKLKDMSYRELLEKLVNYLESKRYLVVLDDVWDVKLWTEINISLPDR
RLGSRILLTTRKEDIAHYSFGVVSHVHLIKPLDNNEAWELFSKKAFSTYHNRFCTPELEP
LASKLVEKCKGLPLAIVALGGLMSSKKSTTEWRDVYNSLNWHLTNNPLLDNVKSILLLSY
NDLPFRLKQCFLYCSLFPEDYLIRRKRLFRLWISEGLVQHVQGVTPQAATENYLMELIVR
SMLQVVRRNETGRPKAFKMHDLMRELALSMSTREKFFVVYDGRESVMEEIGARRLSIQST
EGTEIKSWIGMSKLRTLLVFVTGIIPLSFSNALPSGFKLLRVLDVEDMPLDKLPNDLVYL
FNLRYLNLKGTAIRELPKSIGYLHNLHFLDIRKTKIEALPKGFSKLLNLRHLMMYYNNKD
YNDFKIVSGTRATSNISKLKKLQVLSRVQSEGNIIRLLGNMTQLTRIGITNLTERDEMDL
CDSIQKMKLLTNLSLMVKDEEEFLRADNALFSPPPHLRKLCFIGKLEKVPHWFSSLDSLT
SMHLHWPRLEEDLLSHIEGLPFLGSLTLVNAYVGSELRFSRGFVKLSNLQLFKFPSLSKI
TVEKGVMPNLQFLTLNSCMELKRLPHGLEHLTNLQTLSLEFLSSQLIQSIREGGVDRPKV
QHILEINHFFDSSGGRSCESLSPRALYRGE
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggccttgccgacgacagatttgttgattggaaaaattgtagctattgttgagaatgaa
gcattatccatatccagtgttcgtgatgaaatcgatgagatcaagcaggagctggttagc
atgaaatctttcctgcaggatgctgatggaaagaaagaaaacagcgaaggagaggaaacg
tgggtcgcaagcgtcagagacttggcctatgatgttgaggacataattgatgaattcatg
taccacatatatgagaagcaaactggtggcctatttccaaggtggctccacaagatcatt
cacattccaaggagtctctggtataaacgtcaaattgccaacaaattgcagaaaaccact
aaaatgatcaaagccattccagagaggaatcagagatatgctattggtggtgtagaaggg
acaacaagttcaattgatgttgacaaatgggtgcagaaccaagcagagtcttctcttttt
attaaggaagatgaacttgtaggcattgaaggcaacaagcaaacaataatgggatggctg
atggatgaagagcaacatcaaactattgtctctgtggtcgggatgggaggttcaggaaag
acaactctagttgccaagaccttcaccaatgaaagtgtgaaaagacattttgactgctat
gcgtggattactgtttccagaacctatgccattgaagacttatttagatgcttgatcaag
gagttccaccaatcaagaaaagaaaaggttcctgcacctgcaaaactgaaggacatgagc
tacagagaattgctagagaagctcgtgaactacttggagagtaaaaggtacctagttgta
ttggatgacgtgtgggatgttaaactttggacagaaataaatatatcactccctgataga
cgacttggaagtcggatccttcttacaactcggaaagaagacatagcacattattctttc
ggagtggtaagccatgttcatcttattaagcccttggacaacaatgaggcgtgggagctt
ttcagcaagaaagcattctcaacttaccataatagattttgtacaccggagcttgaaccg
ttagcttcaaaacttgtggagaagtgtaaaggtttgcctcttgcaattgttgctttagga
ggtcttatgtcttccaaaaagtcaaccacagagtggagggatgtctacaacagcttaaat
tggcatctaactaacaatcccttgttagataatgtgaagagcattttgttgctcagttac
aatgatttgcctttccgactcaagcaatgtttcttgtattgttctcttttcccagaagat
tatttgattcgaagaaaaaggctcttcaggttgtggatatctgaaggacttgttcaacat
gtccaaggggtcactccgcaagcagctacagaaaactatcttatggaactcattgttcgt
agcatgctacaagttgtaaggaggaatgaaactgggaggccaaaggcatttaagatgcat
gatcttatgcgggagcttgctctatcaatgtcaacaagagaaaagttttttgttgtatat
gatgggagagaatcagtaatggaagaaattggagcccggcgtttgtcaattcaaagcact
gaaggaacagaaatcaaatcatggataggtatgtcaaagcttcgtacccttcttgtgttt
gtcactggcataataccattatctttctcaaacgcattgccttctggatttaaattatta
agggttctagatgtggaggatatgccacttgataaactgccaaatgatctagtgtactta
ttcaacttgagatatttgaatttgaaaggaactgcaattagggagcttccaaaatccata
gggtatctccataaccttcacttcttggacattaggaaaacaaagattgaggcacttcca
aaaggattttctaagttgctaaacttgcgccacctaatgatgtattataataataaggat
tataatgatttcaagattgtaagtgggacaagagcaacttcaaatatcagcaagttgaag
aaattgcaagttttgtctagagttcaatccgaagggaatatcattagactactcgggaac
atgacccagcttacaaggattggcataaccaacctaactgagagagatgagatggaccta
tgtgactcaatccaaaagatgaaactccttaccaatttgagcttgatggtaaaggatgaa
gaagaatttcttcgagctgataatgcactgttttcacctcctcctcaccttagaaagctt
tgtttcattgggaaactggaaaaagtaccacattggttttcttcactcgacagcctcaca
tccatgcatctgcattggcctagacttgaggaagatttattatctcacatcgaaggactg
ccgtttttgggaagtcttacacttgttaatgcatatgtcgggagtgagttacgtttcagt
agaggctttgtgaagctttcaaatttgcaattatttaaattcccctcattgagtaagata
acagtggaaaagggggtgatgccaaatctccagttcctaacactcaatagctgcatggaa
ttaaagagattgcctcatggtcttgaacaccttactaatctacaaacattgagcttggag
tttctttcgagccaacttatacagtccatacgagaaggaggtgtggatcgtccaaaggta
caacatatcctagaaatcaaccattttttcgactcttcaggtgggaggtcttgcgaaagc
ttgtctccaagggctctttaccgaggagaataa
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