Rosa chinensis (China rose): 112174790
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Entry
112174790 CDS
T06020
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00531
Glycosaminoglycan degradation
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112174790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rcn00536
]
112174790
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
112174790
Glycosaminoglycan binding proteins [BR:
rcn00536
]
Heparan sulfate / Heparin
Enzymes
112174790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
112174790
NCBI-ProteinID:
XP_024168369
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All DBs
Position
6:59240023..59243772
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AA seq
538 aa
AA seq
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MCEIMRALVLLFFVCFWLYDVTHNHNSISVASQSTEEDTVFVNGTAAIGSIDDDFVCATM
DWWPPEKCDYGTCSWGNASLLNLDLGNDILLNAIKAFSPLKLRLGGTLQDKVIYQTEDSP
KHHTSFVKDSSQLFGFSDGYLPMPRWDELNILFKNAGAVVIFGLNALQGRTIDSHGAAVG
DWNASNAESFIRYTVNKGYTIHGWELGNELCGSGVGTRVTADQYASDINSLHNKVQDIYS
GSELAKPLVLAPGGFFDSSWFSDFVDKAPQSVQVLTHHIYNLGPGSAPDLVDKILDPSVL
DGISKTFSDLQMLLKNSKISAVGWVGESGGAYNSGHNLVTNAFVFSFWYLDQLGMAASYD
TKTYCRQTLIGGNYGLLDIQTFQPNPDYYSALLWHRLMGNNVLSTSFSGTKKLRTYSHCS
KKTQGITVLLINLDGNTTVQIDVSTENGGSRSSLNLEQGLKDSKATKNDVREEYHLTAKD
GDLHSRVMLLNGKELTVESAGQIPSLEPMIVGMSDPTSVAPFSIVFVHIPNITVPACK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaataatgcgtgctctggttcttctcttcttcgtttgcttctggctgtacgat
gtcactcacaaccacaactcgatctctgtggcttcacagagcacggaggaagacactgtc
tttgtcaatggaacagctgcaatcggaagcatagacgacgactttgtttgtgctacaatg
gattggtggccgccggagaaatgcgactatggaacttgtagctggggcaatgcttctctt
cttaatctagaccttggcaacgatatacttttgaatgcaataaaagcattttcacccttg
aaacttaggctgggcggcaccttacaagacaaagtcatataccagacagaagacagtcca
aaacatcatacttcatttgtcaaagatagttcacagttgtttggcttctctgatggttac
ttacctatgcctagatgggatgaactgaacattttgttcaagaatgctggggctgttgtt
atatttggactaaatgcactgcaaggcaggaccatagattcccatggtgctgctgtgggt
gattggaatgcgagtaatgctgaatcttttataagatatacagtcaacaaaggatacaca
attcatggttgggagctaggtaatgaactatgtgggagtggagttggaacaagagtcaca
gcagaccaatacgcttcagacataaactctctccataacaaggtgcaagatatttattca
ggttctgaattagctaagccactagtcttggcaccaggagggttctttgattccagttgg
ttctcagattttgttgataaagcacctcaatctgttcaagtactcacacaccacatatac
aaccttggtccaggtagtgccccggatcttgttgacaagatcctcgatccatctgttctt
gatggtatttccaaaaccttcagtgacctacaaatgctacttaagaattcaaaaatttca
gcagtgggatgggttggtgaatcaggaggtgcttacaacagtggtcacaatcttgttaca
aatgcatttgtattcagtttctggtacctggaccagcttgggatggcagcatcttatgat
acgaaaacatattgcagacaaacactcattggtggaaattatggcctccttgacatccaa
acctttcaaccaaatcctgattattacagcgctcttctttggcatcgtctaatgggaaac
aatgtcctgtcaacaagcttttccgggacaaagaaactgcgcacttactctcattgttcc
aagaaaacacaaggaatcacagtgctgctcatcaacttagacggtaacactacagttcaa
atcgatgtttcaactgaaaatggtggcagccgcagtagtttgaatttggaacaaggcctc
aaggattctaaagcaaccaagaacgatgtaagagaagaataccacctaacagctaaggat
ggggacttgcacagccgagtaatgcttctaaatgggaaagaactgaccgtagaatcagca
gggcaaatcccaagcttggagccaatgatagtagggatgtcagatcccacctctgtggca
cctttctctattgtatttgttcacattcccaacataactgtccctgcttgtaaatag
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