Rosa chinensis (China rose): 112174817
Help
Entry
112174817 CDS
T06020
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 20
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112174817
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
112174817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
CoV_NSP15_M
PGA_cap
Motif
Other DBs
NCBI-GeneID:
112174817
NCBI-ProteinID:
XP_024168397
LinkDB
All DBs
Position
6:complement(56694374..56696574)
Genome browser
AA seq
544 aa
AA seq
DB search
MGSQPFSVFKLSTLILHLIPILFASRSLAAEAGCETDPVSKEIICEFTPNPSYCKSMLPN
QTNNVYDYGRYAVRKSLSQSHKLLNLVNKYLQRNSTLSKTAILALEDCKLLAELNVDFLA
SSLQTLNDSNRTLPSSKAEDVHTWLSAVLTNQQTCLDGVQATSSSSWRSMKNGLLLSNNT
NLYSVSLALFTKGWVPENEEEEEREEEGEVITWRKRLLQNFGDVLVRETVTVSQDGSGNF
TTITDAVAAAPVNTKGLNGYFLIYIKAGVYEEYVNIANTKNYLMMIGEGINQTVITGNRS
VVDGWTTFNSATFVVIAPWFVAVNITFRNTAGAIKHQAVAVRNGGDLSAFYNCSFEGYQD
TLYTHSQRQFYRDCNVYGTVDFIFGNAAAVFQKCNIYPRLPMRGQFNAITAQGRADPNQN
TGIMIHNCTIRASDDLASDKGTTRTYLGRPWKEYSRTVYMKSFMDGCIDRDGWSKWTGDF
ALSTLYYAEYKCQGPGSNTSRRVTWPGYHILKKAKQVKKFTVSKFLLGKKWLPQTGVPFS
GGLI
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacaaccattctctgtgttcaaactctcgactctcattcttcatcttattccc
atcctttttgcctctcgatctttagctgcagaggcaggttgtgaaactgatccagtatcc
aaagaaatcatttgcgaattcacccctaacccttcatattgcaagtccatgctacccaac
caaacaaacaatgtgtatgactacggccgttacgcggtccggaaatcattatcacaatcc
cataaattacttaacttggtgaacaagtatctccaacgcaactcgactctctccaaaacc
gcaatcctcgcccttgaagattgcaagcttcttgcagaactcaacgtagattttcttgca
agctccctacaaaccctcaacgacagtaaccgaacacttcccagctcgaaagccgaggac
gtccatacctggctcagtgccgtcctaacaaaccagcaaacatgcttggatggagtacaa
gcaacttcttcatcatcttggaggagtatgaaaaatggacttttgctctccaacaacacg
aacctttatagtgtttctctagctctgttcacgaagggatgggtgcctgaaaatgaggaa
gaggaggagagggaggaggagggggaggtgatcacatggaggaaacggctgcttcagaat
tttggtgacgtgctggtgagggagactgtcactgtgagtcaggacggaagtgggaatttc
accaccataaccgacgctgttgccgcagctccggttaacactaaaggtttaaatggttac
ttcttgatttatatcaaggcaggagtttatgaagagtatgtgaacattgcaaatactaaa
aactatctgatgatgattggtgagggcatcaaccagactgtcataacaggcaatcggagt
gttgtagatggctggacaactttcaattcagcaacatttgtggtaattgcaccatggttt
gtagcagtgaacataaccttccgcaacaccgccggagcaatcaaacaccaagccgtcgcc
gtccgaaacggtggagatttgtccgcattctataattgcagcttcgaagggtaccaagac
accttatacacacattcccaaagacaattctacagagactgcaacgtctacggaacagta
gacttcatatttggaaacgcagcagctgttttccaaaaatgtaacatttacccccggctt
ccgatgcgtgggcagttcaacgccattacggctcagggtcgagcagacccgaatcaaaac
accggcattatgatccacaactgtaccatcagagcatccgatgacttggcttcggacaag
ggaactaccaggacttatctagggaggccatggaaggagtactcaaggactgtgtacatg
aaatccttcatggatggttgcatagatagggacggttggagtaaatggactggagatttt
gctttaagcacattgtattacgccgagtataaatgtcagggccctggatcgaacactagt
agaagagttacatggccaggttaccatatattgaaaaaagctaagcaagttaaaaagttt
acagtgtccaagttcttgcttgggaagaagtggctgcctcaaactggagtgccattttcc
ggtgggttgatttag
DBGET
integrated database retrieval system
