Rosa chinensis (China rose): 112174853
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Entry
112174853 CDS
T06020
Name
(RefSeq) ruvB-like protein 1 isoform X1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112174853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112174853
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rcn03037
]
112174853
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112174853
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
112174853
Chromatin remodeling factors
SRCAP complex
112174853
INO80 complex
112174853
INO80 complex (yeast)
112174853
SWR1 complex
112174853
ASTRA complex
112174853
Cilium and associated proteins [BR:
rcn03037
]
Motile cilia and associated proteins
Dynein assembly factors
112174853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_19
Mg_chelatase
AAA_16
bpMoxR
AAA_18
AAA_25
GvpD_P-loop
Zeta_toxin
DnaB_C
AAA_11
AAA_7
TsaE
AAA_28
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
112174853
NCBI-ProteinID:
XP_024168443
LinkDB
All DBs
Position
6:40907685..40914229
Genome browser
AA seq
458 aa
AA seq
DB search
MDKVKIEEVQSTTKKQRIATHTHIKGLGLEANGRAAPWAAGFVGQGEAREAAGLVVDMIR
QKKMAGKALLMAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELTPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMASPHGIPVDLLDRL
VIIRTQTYGPEEMIKILATRAQVEELVIEEESLAYLGEIGQKSSLRHAVQLLSPASIVAK
MNGRDNICKADLEEVDTLYLDAKSSAKVLQEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtgaaaatagaagaggttcagtccactaccaagaagcagcggatagccact
cacacccacatcaaaggccttggtcttgaggccaatggaagagcagcaccttgggctgct
ggctttgtgggtcagggggaggccagagaagctgctggtcttgttgttgatatgatacgg
cagaagaagatggctggtaaggcacttctgatggctggacctcctggaactggaaagaca
gcactagctcttggaatatcccaggagcttggcagtaaggttccattctgcccgatggtt
ggatctgaagtatactcatcagaagttaagaaaactgaggttttaatggaaaattttaga
cgagctattggtctacgtatcaaggaaaataaagaggtctatgaaggagaggtgacagaa
ctaacaccagaagagaccgagagtgttacgggtggctacggtaaaagcattagccatgta
atcattggattaaaaactgtcaaaggaaccaaacaactgaagttggaccccactatttat
gacgcattgatcaaggaaaaggttgctgttggtgatgtcatatacattgaggcgaatagt
ggagcagtaaaaagggttggtagaagtgatgcttttgccaccgaatttgatctggaagca
gaagagtatgttccactaccaaaaggagaggttcacaaaaagaaggagattgtgcaggat
gtaacactgcatgatctggatgctgcaaatgcacgacctcaaggtggccaagacatatta
tctctaatgggtcagatgatgaaaccaaggaaaacagaaattactgacaagttgcgacag
gaaataaataaggttgttaaccggtatattgatgaaggtgtagcggagcttgtacctggg
gttctgttcattgatgaggtacatatgctggatatggagtgcttttcgtacttgaaccgt
gctttagagagctcgttgtctccaatagtaatatttgccacaaacagaggaatttgcaat
gtaagagggactgatatggctagtcctcacggaatacctgttgacttgttggatcggttg
gtgattatccgaactcagacgtatggtcctgaagagatgataaagattttagcaacccgt
gcacaggtggaggaactagttatagaggaggagagtttggcttacctgggagagataggc
caaaaatcatctttaaggcatgctgttcagctcttgtcacctgcgagcattgtggcaaaa
atgaatggcagagacaacatctgcaaggcggatctagaagaagtggatacactatatctg
gatgcaaagtcttcagcaaaggttctccaagagcagcaggaaaaatacatttcgtaa
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