Rosa chinensis (China rose): 112174934
Help
Entry
112174934 CDS
T06020
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112174934
03036 Chromosome and associated proteins [BR:
rcn03036
]
112174934
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
112174934
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112174934
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
112174934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
112174934
NCBI-ProteinID:
XP_024168494
LinkDB
All DBs
Position
1:complement(5585155..5588272)
Genome browser
AA seq
600 aa
AA seq
DB search
MGSSNSKPHPASAESPPYYSKPSPSSPKPPPYSSKPPSSPACPQPPPYSSKPPSSPASSK
PPSSPVSPQPPPYSSKPPSSPAYSSKPPSSPVSPQPPAYSSKPSSSPFSPKCPPVFKSVL
RPASSSSNNDDISQHQQYEKRTAFVCLEKDPLPVFMIPEDIEALIKKEIAPKVLNRPLSP
TTYKDYFAALLYSEDFYLEKWSDFLLKGVTLALDESSIYKNRKKEALYKNRKKEDKEDKT
FVAFELDRVPEKRPFLLSRDLVLARPVSNSTTEPFKGLIYKVVGSNRVLVEFEDDFYSYH
HSNKKYDISFSFNRVCLKRAHHAVKAASDALFQNFLFPDCDSRASIPTAPALLSTTGHKL
DQDQRSAVGHILRIQGSPPYVVTGPDCEAKSFAYVREPSRTGVVVSEAVYQLCRKSPEYR
ILICAPTNSCCDMLMRSLVKVIPESTMFRANAAFRERDEVPEDILRSSLYKESCFSCPAI
EKLREYKVIFSTFVSSFRLHDKGIAAGHFSHIFLVDASSAIEPETLVALTNFAVKATSVI
VTGNHGNSPLWVRADIARKKGLKISYFERLCKLRPYRSPSPMFITQLDLNQKSEYQTRPF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggtcatctaattctaaaccacatcctgcctccgcagaatccccaccatattattct
aaaccatctccatcttccccgaaacccccaccatattcttctaaaccaccttcatctcca
gcttgcccacaacccccaccatattcttctaaaccaccttcatccccagcttcttctaaa
ccaccttcatctccagtttccccacaacccccaccatattcttctaagccaccttcatcc
ccagcatattcttctaaaccaccttcatctccagtttccccacaacccccagcatattct
tctaaaccatcttcatctccattttccccaaagtgccctcctgtctttaagtcagttcta
cgcccagcctcctcctcctcaaataatgatgatataagtcaacaccaacaatatgagaag
agaacagcttttgtgtgtcttgaaaaggatccattacctgtattcatgattcctgaggat
atcgaagccttgatcaagaaagaaattgcgcccaaagttctgaatcgcccattatctccc
acaacatacaaggactactttgccgctctcttatattctgaagatttctacttggagaaa
tggagtgatttccttttgaagggtgtgacattagcgttggatgaaagttcaatttataaa
aaccggaaaaaggaagcactttataaaaatcggaaaaaggaagataaggaagacaaaacc
tttgtagcatttgagcttgatcgtgttcctgagaaacggccattcctcttatcaagggac
ttggtccttgcacgaccagtgagtaatagtactactgagccctttaagggcctcatctat
aaagttgttgggagcaatcgcgttttggttgaatttgaggatgacttttattcttatcat
cattccaacaaaaaatatgatatcagcttctcattcaatagagtttgtttgaaaagagcc
caccatgccgtaaaagctgcatcagatgccttgtttcagaacttcctcttccctgactgt
gactcacgagcaagcattcctactgcaccagctctgctttctactaccggtcataagctt
gatcaagatcaacgttcggcagtcggacatatcttaaggattcagggctcaccaccttat
gtagtaactggtccggactgtgaagccaaatcttttgcatatgtaagagaaccttcaaga
actggagtggttgttagtgaagccgtataccaattatgtcggaagtcaccagagtatcgc
attcttatctgtgcacctactaacagctgctgcgatatgctgatgagaagcttggtgaag
gtgattccagagtcgactatgtttcgtgccaatgctgcattccgagagagagatgaggta
cctgaggacatcctccgctcatccctttacaaagagtcttgtttttcttgtcctgcaata
gagaaactccgggaatacaaagtgattttctcaactttcgtgagtagcttccgactacat
gataaaggcatagctgctggacattttagccatatttttctggtggatgcttcatctgct
attgagccggaaacattggtcgccctgactaactttgctgtcaaggccactagtgttata
gttactggtaatcatggaaatagtccgctctgggttcgcgctgacattgcaaggaaaaag
ggactcaagatttcatactttgaacgactctgcaagctcaggccatatagaagccccagt
ccaatgttcatcacacaactagacctgaaccaaaagtcagagtaccaaacaagacctttc
tga
DBGET
integrated database retrieval system
