Rosa chinensis (China rose): 112175090
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Entry
112175090 CDS
T06020
Name
(RefSeq) uncharacterized ATP-dependent helicase YprA isoform X1
Organism
rcn
Rosa chinensis (China rose)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
WHD_HRQ1
Helicase_C
ResIII
ubiquitin
Cas3-like_C_2
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
112175090
NCBI-ProteinID:
XP_024168520
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Position
7:complement(4487987..4495986)
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AA seq
1208 aa
AA seq
DB search
MAATRIQIEVRTLTGEATTVSASVNDAVSDLKLLLNQSFPPATNSPNFHLFFKGEKLRLQ
SRIGTHGIKPGEVLVLVPFVKKVANNQSQKCDQSDPSLNTSANRSMSKFANSAWSDMMQD
LSYLRDGSSDGTPSVSNIGSFSVGDGSGDCSCEVKRKRGFGCDEMILDMLWASRSKSVLD
EQNSRRFVELLESVNCLSDPYSGDCMLWRRKASLQGFGLGLPNSNGNSCLCPEWLKKIMK
GFAFLNIFSALVQLQQERTTSTLLEQALKQLATFGVKLDMQDMEHLSVISPKVVLFVKKN
AEETSSGNALVIIECSAEQNHGDRNNHESASKQMDVSKIVNELKMQESSFKSNLWEAVER
LMFIKRNEISSLEDFLISVKDCGAAARGNKVNQATKSHTASTTDSDKKHSAASTSRSHKK
RALCHRTGPLLPVEMVEHLRKRIGSATKIVHVEDIGARNAVHVEVPQELSENLRSVLHSI
GITQLYSHQAESIQASLTGKNVVVATMTSSGKSLCYNLPVIEALSQSSSSCALYLFPTKA
LAQDQLRAFLAMTKGFSGSLNVGIYDGDTNQQERTRLRQNARLLITNPDMLHVSILPHHR
KFGRILANLRYVVIDEAHVYNGAFGCHTALILRRLRRLCSHVYGSDPSFVFSTATSANPR
EHCMELANLPTLELIQNDGSPAARKLFILWNSEDSAIEDISFLFAEMVQHGLRCIAFCKT
RKLCELVFCHTREILQETAPHLAESICSYRAGYIAEDRRRIESDLFNGKLSGIAATNALE
LGIDVGHIDVTLHLGFPGSIASLWQQAGRAGRRERPSLAVYVAFEGPLDQYFMKHPNKLF
GSPIECCHVDAKNQQVLEQHLACAALEHPLSLFYDGKFFGSGLNSAIMSLKSRGFLSYDP
SCDSAAKIWNYIGYQKMPSHSVSIRSIERERYKVMDDQEKEIEEIEESKAFFQVYEGAVY
LNQGKTYLVTSLDLSSKIAWCQKADVNYYTKPRDRTDIHVVGGNVAYPAPAKLSNQFSRT
TARADPCRVTTTWFGFYRVHKGSNMIFDKVNLALPKYTYTSQAVWVPVPRSIIKAVESKQ
LEYRAGLHAASHAVLHVVPLRIICNLSDLAPECADPHDGSYFPERILLYDQHPGGTGVCV
QVHPFFMELLATALELLTSCHCREDDGCPNCIQSFCCKSYNEVLHKDAAIMIIKGILDAN
ISSDSSGS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgactcggattcaaatcgaggtccgtacattgaccggcgaagcgaccaccgtc
tcagcctccgtcaacgacgccgtttcagacctcaagctacttctcaaccagtccttccct
cccgccaccaactctcccaatttccacctcttcttcaagggtgagaagttgaggttgcag
agtcgaataggcacacacgggattaagccgggtgaggttctagtgctggtcccgtttgtt
aaaaaggtggccaataatcagagccagaaatgtgatcaatctgatccatcgttgaatact
tctgctaatcgctccatgtccaagtttgcgaactccgcatggtctgatatgatgcaggac
ttgtcatatttgcgtgatggttcgagtgatggaacccccagtgtgtcaaatatagggagt
tttagtgttggagatggaagtggagattgctcttgtgaagtgaagcggaagagggggttt
ggttgtgatgagatgatattggatatgttgtgggctagtagaagcaagagtgttcttgat
gaacagaattctagaaggtttgttgagcttttggagtcggtgaattgtttatcggatcca
tattctggggactgcatgttgtggagaagaaaagctagcttacaaggctttggcttgggg
ctgcctaacagcaatggtaattcatgcttatgtccagagtggttgaagaaaatcatgaag
gggtttgctttcttaaacattttttctgcacttgttcaacttcagcaggagaggacaacc
tcaactctattggagcaagcactgaaacagcttgcgacgtttggagttaaacttgatatg
caggacatggagcatctttcggttatttctcccaaggtagttctttttgtgaagaagaat
gcagaggagacaagttctggtaatgcactagttattattgaatgctcggcagaacagaac
catggagacagaaataatcatgaatctgcttcgaaacagatggatgtatcaaagattgtc
aatgaattgaagatgcaggaaagttctttcaaaagtaatttgtgggaggctgttgagagg
ttaatgtttatcaaaagaaatgagatttcctccttggaagactttctcatttctgtgaag
gattgcggtgctgctgcaagaggaaataaagttaatcaagcaacgaaaagccacacagct
tcaactactgattcagacaaaaagcactctgcagcttcaacctctcgttcacacaaaaag
cgagcactatgtcatagaacaggtccattgctaccagttgagatggttgaacatcttaga
aagagaattggatcagcaacgaagatagtgcatgtcgaagacattggtgctcgaaatgcc
gttcatgtggaagttccacaggaactatcagaaaatctgagatctgtacttcattctatt
ggaatcactcagttatatagccatcaggcagagtcgatacaagcctcactaactggcaag
aatgttgttgtggctacaatgacatccagtgggaaatctctttgctacaatctaccggtc
attgaagccctgtcccagagttcctcatcatgtgctctatacttatttccaacgaaggct
ttagctcaagatcaactaagagctttcttagctatgaccaaaggattcagtggtagctta
aatgttggtatatatgatggtgacactaatcagcaggaaaggacacgactgcgtcaaaat
gctagactgctaatcacaaatccagatatgttgcatgtatcaatcctgccacaccaccga
aaatttggccggattttggcaaatcttaggtatgtagtgattgatgaggcccatgtttat
aacggagcatttggttgtcacactgctcttatacttaggcgacttcgccggctctgttca
catgtgtatggaagtgatccttcttttgtgttttctactgcgacttcagcaaatcctcgt
gagcattgcatggaacttgcgaatttaccaactctagagttgattcagaatgatggaagc
cctgctgctagaaagcttttcatcctttggaattctgaggacagcgcaattgaggatata
tcattcctgtttgctgaaatggtccagcatggactacggtgcattgcattttgcaaaaca
cgcaagctttgtgaacttgttttttgccatacgcgtgaaattcttcaggagacagcaccc
catctggcagagtctatatgttcttatcgtgctggttacattgctgaggataggagaaga
atagagagtgatttatttaacgggaaactttctggtattgctgcaacaaatgcccttgaa
ttgggtattgatgtcggacacattgatgtaactcttcatttgggttttcccggaagtatt
gctagcttgtggcaacaagctggcagagccggaaggagagagagaccttctcttgctgta
tatgttgcattcgaagggccccttgaccaatattttatgaaacatccaaataaacttttt
ggaagcccaattgagtgctgtcatgttgatgctaagaaccaacaggttcttgaacagcat
ttggcttgtgctgctcttgaacacccactgagcttgttttatgatgggaagtttttcggt
tctggcttaaacagcgccataatgtctcttaaaagtagaggatttctgagttatgatcca
tcatgtgattctgctgctaaaatctggaactatattgggtatcagaaaatgccttcacat
tcagttagtattcgatcaattgaaagagagagatacaaagttatggacgatcaagagaaa
gaaatcgaagagattgaggaaagcaaggctttctttcaggtatatgaaggtgctgtttat
ttgaaccaaggaaagacatacctggtcacgagcttagatttatctagcaagattgcttgg
tgccaaaaagctgatgtaaattattatacgaaaccccgtgatcgcacagatattcatgta
gttggtggtaatgtggcttatccagctccagctaagctttccaaccagttctccagaaca
actgcccgagcagatccttgcagagtaacaactacatggtttggattctatcgtgtacac
aaaggaagcaacatgatatttgataaagttaaccttgcacttcctaaatatacgtatacg
tcacaggcagtttgggttccggttccacgatcaataattaaagcagtggagagtaaacaa
cttgaataccgtgcagggctgcatgctgcatcacatgctgttctgcacgttgtgcctcta
cgaatcatttgtaacttatctgacttggctccagagtgtgcggaccctcatgacggcagc
tattttccggagaggattctattatatgatcagcatcctggagggactggtgtctgtgta
caggttcatccattttttatggagctcttggctactgctctggaactcctgacatcttgc
cactgcagagaagatgatggttgccctaattgcattcagagtttttgttgcaagtcatat
aatgaggttttacacaaggatgcagcaattatgatcattaagggtattctggatgcgaat
atatcttctgactcttctggatcttga
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integrated database retrieval system
