Rosa chinensis (China rose): 112175238
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Entry
112175238 CDS
T06020
Name
(RefSeq) pleiotropic drug resistance protein 1 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112175238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112175238
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112175238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_16
ABC_trans_N
AAA
AAA_25
AAA_29
SMC_N
AAA_22
AAA_30
AAA_18
RsgA_GTPase
AAA_33
nSTAND3
AAA_23
AAA_28
Rad17
DO-GTPase2
NTPase_1
AAA_17
NACHT
nSTAND_NTPase5
RuvB_N
AAA_5
cobW
AAA_11
T2SSE
DO-GTPase1
AAA_19
Motif
Other DBs
NCBI-GeneID:
112175238
NCBI-ProteinID:
XP_024168666
LinkDB
All DBs
Position
7:complement(19418192..19425770)
Genome browser
AA seq
1408 aa
AA seq
DB search
MTTWGAIERLPTYSRTRRGILLGQGQEEDGESREIDIKKNLGLPERKTLLERLVKIVEQD
NDKFLLKIKDRMNRVGLEFPTTEVRFENLNVEAEAYVGSRASSTMFNFSINMLEGFLNYF
HILPSRKRPFTILHDVRGIIKPRRMTLLLGPPGSGKTTLLLALAGKLGKANLKFSGRVTY
NGIEMDEFVSERTSAYVSQHDLHIPELTVRETLAFAARCQGVGPRYEMLVELLRREKAAN
IMPDLDLDLYMKAAALEGQETNIVTDFILKVLGLEDCADIMVGDEMTRGISGGQKKRLTT
GEMLVGPERVLLMDEISNGLDSSTTLQIVKSLQQYVHILNGTALIALLQPAPETYDLFDD
IILLSDGYIVYQGPRENVLEFFEYMGFKCPERKGVADFLQEVTSRKDQEQYWAHMDRPYS
FVTTKEFSEAMQLFHIGRKLGDELSIPFNKSEGCRAALSTKKYGVSKKEMFKACMARQIL
LTKRNSFVYIFKLVQLILVAVTTMTLFFRTEMERNTVEDGRIYTGALFYTLLAIMLNGFA
ELHMTVTRLPVFFKQRDHLFYPAWAYSLPPWLIRIPITFVDVFIWMIITYYSVGYDPSIA
RFFKQFLLLLCISQMANGLFRLIGALGRNITIANTFGFGTLLVILGLCGFIISKEDLKKW
LLWGYWLSPITYGLNAIAVNEFLGKSWRHVPANSTEALGVMVLKYQGIPPEARFYWIGLV
ALIGFILLLNFLFTLALQYLDRKCLGILSSVYTWTLALLCFDNPNNFLDAALEMPNAVLY
NEASSTTEDSKVASDPTIQHGMVLPFEPLSITFEEIRYAVDMPEEMKDQSKTQDRLELLK
GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYIEGRITLSGYAKRQETFARISGY
CEQTDIHSPHVTVYESLVYSAWLRLPQEVDSPTRKMFIEEVMELVEMTSISDRLVGLPGV
NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH
QPSIDIFDAFDEMLLLKQGGEEIYVGPLGHHSSQMIEYFEEISGVSKIKDGYNPATWMLE
VTSPAQEASLGVDFAKIYKNSEIYRTNKALIKELSTPAPNSKDLYFPTQYSQSFFTQCLA
CLWKQSVSYWRNPQYTAVRLLFTAMMAGLLGSFFWDLGSKRQKQRDLFCAMGSMYAAVLF
LGIQNSLSVQPIIGVERLVSYRETAAGMYSAFPFAFGQAIIEIPYTLIQTIIYGVIVYSM
VGFDWTVSKFFCYLLFMYLTFLYFTFHGMMIVAITPNNTISAVVSSAFYPLWNVISGYLI
PKTRIPIWWRWFYWVSPTSWSLYGLFSSQFGGLKDTLDSGETVDHFMRTYFGYRKDFLGV
VVAVLVGFSAFFVFIFAFAIKKLNFQKR
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatggggtgccattgagagactgcctacgtattcacgcacaaggagaggcatt
ctactcggtcaaggtcaagaggaggacggtgaaagcagagagattgatataaagaagaat
cttggactaccagagaggaagactttgttggagaggctagtgaagattgttgagcaagac
aatgacaagttcttgctcaagatcaaggaccgcatgaatagagttggacttgaatttcca
acaactgaagtgcggttcgagaatttaaatgttgaagcagaagcttatgtaggaagcagg
gcatcatctacaatgttcaacttctctattaatatgttagaggggttcctgaattatttt
cacattcttccaagtagaaagagaccatttacaatcctccatgatgtaagagggattatc
aagccaagaagaatgacacttcttttaggcccccctggctctggaaagacgacgttacta
ttggccttggctggaaaactcggtaaagctaatctaaaattttcggggagagttacatac
aatggaattgagatggatgagtttgtatcagagaggacatcagcttatgtcagtcaacat
gatctccacataccagaattgacagtgagagaaacactggcttttgcagctagatgtcaa
ggtgttggaccgcgttatgaaatgttggtggaattattaaggagagaaaaggctgcaaat
attatgccagatcttgatcttgatctctacatgaaggcagcagcactagaaggacaggaa
actaatattgttacagactttattctcaaggttttgggactcgaagattgtgctgacatt
atggtaggagatgaaatgaccagaggtatctctggtggacaaaaaaagcgactcaccaca
ggggagatgctggttggaccagaaagagtacttcttatggatgagatatcaaacgggctg
gacagttcaacaacattgcaaatagtgaaatcactacaacaatacgtccacattctcaac
ggaactgcattgattgctctactgcagccagcaccagagacttatgatctcttcgatgat
ataattctcctttcggatggctacattgtgtatcaaggtccccgtgagaatgttcttgag
ttctttgagtacatgggcttcaaatgtccagagaggaaaggagttgctgatttcctacaa
gaggtgacatcaagaaaagatcaagagcaatactgggctcatatggataggccttatagc
tttgtaacaaccaaagaattttctgaagcaatgcagttatttcacattggtagaaaactt
ggtgatgagctttctattccatttaacaagtcagaaggctgccgtgctgctttgtcaact
aaaaaatatggtgttagtaagaaggaaatgttcaaagcttgtatggccagacaaattttg
cttacaaagaggaattcatttgtctacattttcaaattggtgcagcttattctagttgct
gttacaacaatgacactattttttcgtactgagatggagcgaaacacagtagaagatggt
aggatttatacgggagctttattctatacgctactcgcaattatgcttaatgggtttgca
gagcttcatatgacagtcactagactgcctgtgtttttcaagcaaagggaccatctgttc
tatcctgcttgggcatactctttacccccatggctgataaggatccctataacttttgtg
gacgttttcatctggatgatcattacttactacagtgtaggttatgatccgagcattgca
agatttttcaaacaattccttctcctgctgtgtattagccagatggcaaatggactgttt
cgattgataggggcactagggaggaatataactattgcaaatacatttggatttggtact
ttacttgtcattcttggtctgtgtggctttatcatttcaaaagaggatttgaagaaatgg
ttgttgtggggatattggctctcaccaatcacgtatggactgaatgccatcgctgttaat
gaatttcttggaaaaagttggagacatgttcctgccaactcaacagaagcattaggagtt
atggtcttgaagtatcaaggcatacccccagaggcacgcttctactggattggattagta
gctttgattggatttattcttctgttgaatttccttttcaccttggcacttcagtatctt
gatcgtaagtgcctaggcatattatcttctgtttacacatggacactagcattgttatgt
tttgacaatcctaacaatttcctggatgcagcacttgagatgcccaatgcagtactatac
aatgaggcatcctctacaacagaggatagcaaagttgcaagcgatcctactatacagcat
ggcatggttcttccatttgaacccctttcaattactttcgaggaaatcagatatgctgtc
gatatgcctgaggaaatgaaagatcaaagcaaaactcaggataggctagaacttctgaag
ggtgtgagtggtgcttttaggcctggagttctaacagctttgatgggtgttagtggtgct
ggaaaaaccactctcatggatgtcttggcaggaaggaagacaagtgggtatattgagggg
aggatcaccttatctggatatgcaaaaaggcaagaaacatttgctcgcatatcaggatac
tgtgaacaaacagatatacactcccctcatgttacagtttacgagtctttggtttactct
gcatggctccggttgccccaggaggttgattccccaaccagaaagatgtttattgaggag
gttatggagcttgtagaaatgacctcaataagtgacagacttgttggattgccaggagtg
aatggtctctcaactgaacaacgcaaaaggctaacaattgcagtagagcttgttgccaac
ccctcgataatatttatggatgagccgacttctggccttgatgctagggcagcagcaatt
gtaatgagaacggtgaggaatacagtggacactgggagaactgtagtctgtacaatccac
caaccaagcattgatatatttgatgcatttgatgagatgttgcttctgaaacagggaggc
gaagaaatatatgttggccctttaggccaccattcttcccagatgatcgaatactttgag
gagattagtggagtttctaaaatcaaggatggttacaatccagcaacctggatgttggag
gttacttctccagcacaagaagcatctcttggggttgattttgccaaaatatacaagaat
tcagaaatatataggacaaataaggcattgataaaggaactaagtactcctgcaccaaat
tcaaaggacttgtacttcccaacacaatattcgcagtctttctttacccagtgtctagct
tgcctatggaaacagagtgtatcatattggcgaaaccctcaatacaccgcagtaagactt
cttttcacagctatgatggccggactacttgggtcatttttctgggatcttggctccaaa
agacaaaagcaaagagatctcttttgtgcgatgggttctatgtatgctgctgtgcttttt
cttggtatacaaaattccttgtcagtgcagccaatcataggtgttgagaggttggtctct
tacagagaaacggctgctggaatgtactcagcttttccatttgcctttggacaggctatc
attgagatcccgtacactttgatccagactattatatatggggtcatagtatactccatg
gtcggatttgattggacagtcagcaagttcttttgttatctcttgttcatgtacctcacc
ttcttatacttcaccttccatggcatgatgattgtggccattactcccaacaacaccatc
tctgctgtagtttcgtctgccttctatccattatggaatgttatttcaggatatctcatt
cccaaaacaagaattccaatatggtggagatggttctattgggtcagcccaacctcttgg
agcttgtatggattgttttcttcacagtttggaggtctcaaggacacacttgattctggt
gaaactgtagatcattttatgaggacatattttggatataggaaagactttctaggtgtt
gttgtagctgtacttgttgggttttcagcgttctttgttttcatctttgcttttgcgatc
aagaaactaaacttccaaaagagatga
DBGET
integrated database retrieval system
