KEGG   Rosa chinensis (China rose): 112175409
Entry
112175409         CDS       T06020                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112175409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112175409
   03036 Chromosome and associated proteins [BR:rcn03036]
    112175409
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     112175409
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    112175409
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WD40_RFWD3 Vitelline_membr
Other DBs
NCBI-GeneID: 112175409
NCBI-ProteinID: XP_024168850
LinkDB
Position
7:complement(49021743..49029506)
AA seq 348 aa
MSTFMAASNPNPNKSFEVAQPPTDSVSSLSFSPKANFLVATSWDNQVRCWEIQQSGGNVA
SMPKAAISHDNPVLCSTWKDDGTTVFSGGCDKQVKMWPLMSGGNQTMTVAMHDAPIKEIA
WIPEMSLLVTGSWDKTLKYWDTRQPNPVHTQLLPERCYALSVRHPLMVVGTADRNLIVYN
LQSPQTEFKRIISPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEAQQSKNFTFKCHR
EGNEIYSVNSLNFHPVYHTFATAGSDGSFNFWDKDSKQRLKAMARCSQPIPCSTFNNDGS
IFAYSVCYDWSKGAENHNPATAKNYIYLHVPQESEVKSKPRISTGGRK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtcgacgttcatggccgcttccaatccaaatccaaacaaatccttcgaggtcgctcag
cccccaaccgactccgtttcgagtctcagcttcagccctaaggctaactttctggtcgca
acctcctgggacaaccaggtgcgatgttgggagatacaacagagtggaggaaatgttgcc
agtatgcccaaggcagctatatcgcacgataatccggttttgtgctcaacttggaaagat
gatgggacaactgtgttctctggaggttgtgataagcaagttaagatgtggcctctgatg
tctggtggcaaccaaacaatgactgttgcgatgcatgatgcgcccatcaaggaaatagct
tggatccctgagatgagcctcttggtgacaggaagctgggacaagactttgaagtattgg
gatacaaggcagccaaatccagtgcatacccaactactcccagagaggtgctatgcatta
tcagtgagacaccctctgatggtggttggaactgctgatcgaaatcttattgtttataac
ttgcagagtccacagactgagttcaagagaatcatttcacccctaaagtatcagacaagg
tgtgttgcggcatttcctgatcagcaaggattcttggttggctctattgaagggcgggtt
ggtgtacatcatctggatgaggcacaacaaagtaaaaactttaccttcaaatgccacaga
gagggcaacgagatatactcagtcaattctctgaacttccatcctgtgtatcacacattt
gctactgctggttctgatggttctttcaacttttgggataaggacagcaaacagagacta
aaggccatggcaaggtgcagtcaaccaataccttgcagcactttcaacaacgatggttcc
atatttgcatactcggtttgctatgattggagtaagggcgcagaaaatcacaatccggcc
acagcaaagaactacatttacctccatgttccacaggaatctgaggtgaaaagcaagcca
cgaatctcaactggtggaagaaagtga

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