Rosa chinensis (China rose): 112175566
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Entry
112175566 CDS
T06020
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112175566
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112175566
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
90S particles
Helicases
112175566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
WHD_HA2
HA2_C
Motif
Other DBs
NCBI-GeneID:
112175566
NCBI-ProteinID:
XP_024169018
LinkDB
All DBs
Position
7:38982386..38984586
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AA seq
579 aa
AA seq
DB search
MLPAAAQHRVFDEVKEGERLVVVATNVAETSVTIPGIKYVVDTGKVKSKEYNFKNGSEIY
KVQWISKASAVQRAGRAGRTGPGHCFRLYSSAAFNNIFDDSSPSEISKVPLEGHILLLKS
MDIELSAFPFLTRPNDDALNGGQRCLEILEALTEDGEVTPLGKAMAYYPISPRHSKMLLT
VIKMLNKEKSYKRPNLVLAYAVASAAALSLSNIFVSQFEDSCTENHDLIDGNSSAPVHGE
VIDKQDRVIKEKKVRASCENFSSHSSDALSRAYVLRLYELSKSRLHFCKDNALHPETMHE
ISELREQLLKLVFYHSGVSGGEFSWIHGSQEDVEHDWRADVIPLSLDEEGLLCRAICAGW
ADRVAKRIKGSKNQYQTCLSNENVFLDRQSSVSKIAPEYLVYSELIQKKKPYMHGVTCIE
PEWLVDCGRVLCKLPKGSAPYYDCVSDKVLYNVTPTFGPHLWKLPEHCLPIDKTEFKGAV
QAFAFALLDGKVLRCLRPVRAFMAEHPRTVLKPVAANRERVQNLLLKLGEKKIHSRAMLR
AVWSKNPNELYLEIRNWFRKNFHYKFKDIWVEMLREAVY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctgcagcagctcagcatcgtgtatttgatgaagtaaaggagggagaacggctt
gttgttgtggccaccaatgttgctgaaacctctgtcactatacctgggataaagtatgtt
gtcgatactggaaaagtgaaatcaaaggaatacaactttaaaaatggaagtgaaatatat
aaagtacagtggattagtaaggcatcggctgttcaacgtgcaggaagagctggaagaaca
gggcctggtcactgtttccgcctttattcttcggcagcatttaataatatcttcgatgac
agttccccatctgaaatatccaaagtccctcttgaaggtcacatccttcttttgaagtcc
atggacattgagttgtctgcttttccttttcttactcgtccaaatgatgatgctcttaat
ggaggacagcgttgcttggagatccttgaagcgcttactgaggatggagaagtgacacct
ctagggaaggccatggcttattatcccataagtcctcgccactctaagatgctcctaaca
gtcatcaaaatgttgaataaggagaaaagttataaacgacctaatttagtactagcatat
gcagttgcttcagctgcagctttgagtttgtcaaatatttttgttagtcagtttgaagac
agttgcacagaaaaccatgacttaattgatggaaattccagtgctccagttcacggtgaa
gttatagacaagcaagacagagtgatcaaagagaagaaagtgagagcgtcttgtgaaaat
tttagtagtcatagcagtgatgccctttccagagcttatgttttgcggctctatgaactt
tccaagagccgattgcatttctgcaaggacaatgctctacacccagaaaccatgcatgaa
atatccgagctgagagagcagctactcaaacttgtcttttatcatagtggtgtgtctggc
ggtgaattttcatggatccatggtagtcaggaagatgttgagcatgattggagggctgat
gttatccctctttctttggatgaggaaggcctcttgtgccgggccatctgtgctggttgg
gcagatagagttgccaagcgcattaaaggaagtaaaaatcaatatcaaacctgcttgagt
aatgagaatgtctttctcgaccgccagtcatctgtttctaaaattgctcctgaatatttg
gtgtacagtgagttgatacagaaaaagaaaccatacatgcacggtgttacttgtatcgaa
ccagaatggcttgttgactgtggtcgggtcttatgcaagcttccaaagggcagtgcacct
tactatgactgtgtaagtgacaaggtactatacaatgtcactccaacctttggtcctcat
ttgtggaagcttccggaacattgtttgcctattgataagactgagtttaaaggtgcagtg
caagcttttgcttttgctttgttggacggcaaggttctgcgttgcctgagacctgtgcgt
gcattcatggcagaacatcctcgtactgttttaaagccagtggcagcaaatcgagaacgg
gttcagaatctcttgttgaagttgggggagaagaagatacacagccgtgctatgttgaga
gcagtgtggagtaaaaatcccaacgaattgtatctggaaatccggaactggtttagaaag
aatttccactataagtttaaggatatttgggtcgaaatgcttcgtgaagccgtttactaa
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