Rosa chinensis (China rose): 112175666
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Entry
112175666 CDS
T06020
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112175666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112175666
Membrane trafficking [BR:
rcn04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
112175666
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
DUF3792
Cauli_AT
Pox_EPC_I2-L1
XhlA
Motif
Other DBs
NCBI-GeneID:
112175666
NCBI-ProteinID:
XP_024169146
LinkDB
All DBs
Position
7:complement(3430768..3432363)
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AA seq
229 aa
AA seq
DB search
MHDLDSGTMSDVFEGYERHYCELSVNLSNKCTPTTIVDGEQRKQRNAEIKAALDEADDLI
RKMDLEARSLQPSVKTTLLPKVREYKTDLNNLKSLVKRITTTEISHLAREELLGSGEADT
LTASNDQRGRLLMTTERINQSSDRIKASRRTVLETEELGVTILQELHQQRQSLLHSSNNL
HAVDETITNSKKVLVAMTRRMSRNKWIMGSIVGVLVLAILLILYLKISH
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatctggattctggaacaatgagtgatgtatttgaggggtacgagcgccattac
tgcgagctctctgtcaatctctcaaacaaatgcacaccaaccaccattgttgatggagag
caaaggaagcagagaaatgcagagataaaagctgcattggatgaagctgatgatttgatt
aggaagatggacctcgaggcaaggagtctgcagccgagtgtgaagacgacgcttcttccc
aaggtgagagaatacaaaaccgatttgaacaacttgaagagcctagttaagagaataaca
acaacagagatcagtcatttggcccgcgaggagttgttggggtctggagaagcagatacc
ttgacggcctcaaatgatcaaagaggaaggttgttgatgacaacagaaagaataaaccag
tcaagtgacagaatcaaggcgagtagaagaacagtgctggaaacagaggagcttggtgtt
acgattctccaagaattgcatcaacaacgccagtctcttctacattccagtaacaatttg
catgcggtggatgaaactattaccaacagtaagaaggttctggtagccatgacaagaagg
atgagcagaaacaaatggatcatgggttccattgtaggagttctggtccttgcaatcctg
cttattctttacttgaagatatcacactag
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