Rosa chinensis (China rose): 112175688
Help
Entry
112175688 CDS
T06020
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04016
MAPK signaling pathway - plant
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112175688
04075 Plant hormone signal transduction
112175688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112175688
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112175688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
Bap31_Bap29_C
PUMA_CC
bHLH_INO4
Snapin_Pallidin
bHLH_SAC51
DMPK_coil
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
112175688
NCBI-ProteinID:
XP_024169176
LinkDB
All DBs
Position
7:complement(27189362..27192061)
Genome browser
AA seq
693 aa
AA seq
DB search
MTDYRIPPTMNLWTDDNASLMEAFMSNSDLTSFWAAQPAQPATQPAHPLHQPQSSASTSD
YPRPPAAQSQSQSQPPPPPAAAPFNQETLMQRLQALIEGARESWTYAIFWQSSYEMSGAS
VLGWGEGFYKDERDKVKAKPKTTTSLVEQEYRKKVLRDLNSLISGADNTAEDDVVDQEVT
DTEWFFLVSMTQNFVNGVGLPGQAFFQSNPVWVAGPDRLADSPCERARQGQLFGLQTMVC
VPTANGVVELGSTELIYQSADLMNKVRVLFDFNNLEVGSWPMGGAADQGENDPSSLWIND
NPASTIEVVKDSVHMGPATSGPSTSNHQISKPIQFDSHPSSSGLSENPSAVLQVQSQSNH
HHQAQQQVQTQSFFTRELNFSDYNAYDGSSVKNSNSNSHSLKPESGEILNFGESKRTSYS
ANNGKLFSAQSQIAAEDNNKKKRSPPSRGSNDEGILSFSSGVILPSSSGVVKSSAGPVDS
DHSDLEASVAKEADSSRVVDPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL
RAVVPNVSKMDKASLLGDAISYITELKTKLQTTESDKEDLHKQVETLSKELQESRTSSGL
DQELKGSNKLIDLDIDVKILGWDARIQIQCSKKNHPAARLMAALMELDLDVHHASVSVVN
DLMIQQATVRMGSRIYTQEQLRLALSAKVGDAR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacggactaccggatacctcccaccatgaatctctggacggacgacaacgcgtctctc
atggaagccttcatgagcaactccgatctcacctccttctgggccgcccagccggcccag
cccgcaacccagcccgcacatcccctccaccagcctcagtcctccgcttccacctccgac
tatccccgccctccggccgcgcagtcgcagtcgcagtcgcagcctccgccgccgccggcc
gctgcgccgttcaaccaggagacgcttatgcagcggcttcaggcgctgatcgagggagcc
agggagagctggacctacgccatcttctggcagtcgtcgtacgagatgtccggagcttcc
gtgctcggatggggcgaggggttctacaaggacgagagggacaaggtgaaagcgaagccc
aaaacgacgacgtcgttggtcgagcaggagtaccggaagaaggtgctgagagacctcaac
tctttgatttccggggccgacaacaccgccgaggacgacgtcgtggatcaggaagtcact
gatacggaatggttcttcctcgtttccatgacccagaacttcgtcaacggcgtcgggttg
ccgggtcaggctttttttcagtccaacccggtctgggtcgccgggccggaccgcctcgcc
gactcgccgtgcgagcgggccagacaaggtcagttgttcggcctacagactatggtctgc
gtcccgacggcgaatggggtcgtcgagttgggctcgacggagcttatataccagagcgcg
gatctgatgaacaaggtccgagtgttgtttgatttcaataaccttgaagtcggttcttgg
cccatgggtggcgccgccgatcagggagagaacgacccgtcgtcgctgtggatcaacgac
aacccggccagcacaattgaagttgtcaaggactcagtgcacatgggtccggcgacttca
ggacccagtactagtaaccatcaaatctcgaagccgattcagttcgacagccaccctagt
tcgagtggcttatccgagaatccgagcgccgttctccaagtacaatctcagagcaatcac
caccaccaagcccagcagcaagtacagacgcagagcttcttcaccagggagctgaacttc
tccgattacaacgcctacgacggcagcagcgtcaagaattcgaattcgaattctcattcc
ttgaagccggaatccggcgagatattgaacttcggcgagagcaagaggacatcttacagt
gccaacaacgggaagttgttttcggctcaatcccaaatcgccgccgaagacaacaacaaa
aagaagagatcgccgccgtcgaggggcagcaacgacgaggggatcctgtcgtttagttcg
ggagtgattctaccgtcgagcagcggcgtcgtgaaatcgagcgccggcccagtagattcc
gaccactccgacctcgaagcctccgtggctaaggaggctgacagtagcagagttgtggac
ccggaaaaacgaccccggaaaagaggtcgtaaaccggcgaacggcagagaggagccgctg
aaccacgtagaggcggagagacagagaagagagaagctcaaccagagattctatgctctc
cgagctgtcgtcccaaatgtttcgaaaatggacaaggcatctctgcttggagacgccatc
tcttacatcaccgagctcaagacgaagctgcaaacgacggagtccgacaaggaggacctc
cacaagcaagtggagacgttaagtaaagagctacaagagtcccgaacgtcttcgggtttg
gaccaagagcttaaagggtctaataagttgatcgatttggatattgatgtgaagatactc
ggatgggacgctaggattcaaattcaatgtagcaagaagaaccaccctgcggcgagacta
atggcggcgctgatggagctggacttggatgtacaccatgccagcgtctcggtagtcaat
gatttgatgatccagcaagccacggtgaggatgggcagccggatttacacgcaggagcag
ctcaggttagctctatcagccaaagtgggggatgccagataa
DBGET
integrated database retrieval system
