Rosa chinensis (China rose): 112175898
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Entry
112175898 CDS
T06020
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112175898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112175898
Membrane trafficking [BR:
rcn04131
]
Endosome - Golgi transport
Others
AP-4 complex
112175898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
HEAT
Cnd1
HEAT_2
INTS1_R4
TOR1L1_N
PDS5
NPHI_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
112175898
NCBI-ProteinID:
XP_024169405
LinkDB
All DBs
Position
7:32920583..32931194
Genome browser
AA seq
973 aa
AA seq
DB search
MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEERIVLHEIETLKRRLSEPD
IPKRKMKEYIIRLVYVEMLGHDASFAYIHAVKMTHDDNLVLKRTGYLAVSLFLNDDHDLI
ILIVNTIQKDLKSDNYLVVCTALNAVCKLINDETVPAVLPQVVELLGHQKEAVRKKAIMA
LHRFYQKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLITIDVNTYKDLVVSFVSIL
KQVAERRLPKTYDYHQLPAPFIQIRLLKILALLGSGDKQSSEKMYMVVGDIFKKCDSTSN
IGNAVLYECICCVSAIHPNPKLLEQAAQVISRFLKSDSHNLKYMGIDALGRLIKISPEIA
EQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMISLNDNHYKTYIAS
RCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNVKVAHNLMKLIAEGFGEDDDTADSQLRS
SAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYITGKLCDVAEAYSNDETVK
AYAVTAIMKIYAFEISSGRKVDMLPECQSLVEELSASHSTDLQQRAYELQAVIGIDAHAI
ESIMPSDASCEDIEIDKNLSFLNGYVQQAIEKGAQPYISENERSGVSSINNFRSQDQHEA
LSHSLRFEAYELPKPLVPSRVPPAAVASSTELVPVPEPSYARETHQSASLPSVSDAGSSE
LKLRLDGVQKKWGRPTYSSSASSTSTSSSHKTTNGITQVDGVSTSNSKARDTYDLRKPSV
EISPEKQKLASSLFGGPSRTEKRPSSGNHKVSKATEKSQVSKAAGAHTDAAVEKTNHEPT
PDLLDFSDSTVTGTAPSIDPFQQLEGLLDQTEATSTVNNGPAGASKTPEIMGLYADTPVS
GLSSSVGNPVLTNRDDFNLASELSNATRTSQVGVSQSNRGPNPKDSLEKDALVRQMGVTP
TSQNPNLFRDLLG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcaagaccatcggccgggagctcgccatgggctcccaaggcggcttcggc
caatccaaggagttcctcgacctcgtcaagtccatcggcgaagctcgatccaaggccgaa
gaggagcgcatcgtcctccacgagatcgaaaccctaaaacgacgcctctccgagcctgac
atccccaagcgcaagatgaaggagtacatcatccgcctcgtctacgttgaaatgctcggc
cacgacgcgtcgttcgcttacatccacgccgtgaagatgacgcacgacgacaatctcgtc
ctcaagcgcaccggctacctcgccgtctcgctcttcctcaacgacgatcacgacctcatc
attctcatcgtcaacaccatccagaaggacctgaagtctgacaattacctcgtcgtttgc
accgccctcaatgccgtctgcaagctcatcaacgacgagaccgtgcccgccgttttgccc
caggtcgtggagctcctagggcaccagaaggaggcggtgaggaagaaggcgatcatggct
cttcatcggttttatcagaagtcgccgtcgtcggtttcgcatctggtgtccaatttccgg
aagcggctctgtgataacgatcctggagtcatgggagccacgctgtgcccgttgttcgat
ctcattaccatcgatgtgaatacgtataaggatttggtggttagctttgtgagcattctg
aagcaagttgcagaacgtaggttgcccaagacctatgactaccatcagcttccagcgccc
tttattcagattaggttgttgaagattttggcattgttggggagcggggataagcaatcg
agtgagaagatgtatatggtagttggcgacatatttaagaagtgcgattccacgagtaat
ataggaaatgcagttctttatgagtgtatttgttgcgtttctgcaatacatcctaatccg
aagttgttagaacaggctgctcaagtcatctcaagatttttgaagagtgacagtcataat
ttgaaatatatgggcattgatgctcttggtcgactgataaagatcagtccggagatagct
gagcaacaccagttggctgtcattgattgcttagaggacccggatgatactttgaagcga
aaaacatttgaactgttatacaagatgacaaagtcctccaatgtggaggtgattgttgac
cgtatgattgattacatgataagccttaatgataaccattacaaaacatatatagcatct
cgatgtgtggagcttgctgagcaatttgctccgagcaatcaatggtttatccagaccatg
aataaagtcttcgaacatgcgggagatttggtgaatgttaaggtggcacataacttgatg
aaattgatcgccgagggatttggagaggatgatgatactgcagatagtcagttgagatca
tctgcggtggagtcatatttgcgcatcattggagagccaaagcttccgtctgtatttctt
caggtcatttgttgggttttgggggaatatggaactgctgatggaaagtattctgcttcg
tatatcactgggaagttatgtgatgtggcagaggcatattcaaatgatgaaactgtcaag
gcttatgctgttacagcaatcatgaaaatatatgcatttgaaatatcatctggaagaaaa
gtggatatgctacctgagtgtcaatctttggtggaggaattatcagcttctcactcaaca
gatctccagcagcgtgcatatgaattgcaagctgtcattggcatagatgctcatgccatt
gagagtattatgccatcagatgcaagttgtgaagacattgagatcgataaaaacctttca
ttcctcaatggttatgtccaacaggcaatagaaaaaggtgctcagccatatatttctgag
aatgagcgctctggagtgtcaagtattaacaatttcagaagccaagatcagcatgaagct
ttaagtcacagtcttcggtttgaggcctatgagcttccaaagccactggtgccatcaaga
gttcctccagctgcagttgcatcctcaactgaacttgttccagtgcctgaaccatcttat
gctagggagacacaccagtctgcatcattgccatctgtgtcagatgcaggatcgtcagaa
cttaaattacgacttgacggtgttcaaaagaaatggggtaggcctacatactcatcttct
gcatcttcgacctcaacttctagttcccacaaaacgacaaacgggatcacgcaggtagat
ggtgtgagtacttcaaattcaaaagcacgtgatacttatgacttgaggaagccatcagtt
gaaatttctccagaaaagcagaagttggccagttcactttttggcggtccatcaagaacc
gagaagaggccatcttcgggcaaccataaagtgtccaaggccaccgagaagtcgcaggta
tcgaaggcagcaggtgcacacactgacgctgcagtggagaaaacaaatcatgaacctact
ccagacttgcttgacttcagtgattcaactgttactggtactgctccgtctatagatcct
ttccagcagttggaagggcttcttgatcaaaccgaagctacatcaactgtgaataatggt
ccagcaggtgcttcaaaaacacctgaaattatgggattatatgctgatactcctgtcagt
gggctcagtagcagtgttggcaaccctgtgttgaccaatagggatgactttaatcttgca
tctgagttatcaaatgctacaaggacttctcaagttggggtatcccaatcgaataggggt
cctaaccctaaagattcattggaaaaggatgcacttgtaaggcagatgggcgttaccccc
acaagtcagaaccccaacttgtttagagatttgcttggctag
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