Rosa chinensis (China rose): 112175924
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Entry
112175924 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112175924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112175924
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112175924
SSDB
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Paralog
GFIT
Motif
Pfam:
cNMP_binding
DsrC
Motif
Other DBs
NCBI-GeneID:
112175924
NCBI-ProteinID:
XP_024169430
LinkDB
All DBs
Position
7:30654605..30657745
Genome browser
AA seq
616 aa
AA seq
DB search
MFNQHPSEVAIDLSTSHRSLTRESDQEYKGELWQILSEKILDPSDSEPTRYFPIWEDKIF
LICCAFAVLYNPLFMYLPVIYPQKLCFEWDVSLMWIYVGLQSAIDMFYAMDIFIFSWRIR
GERNAKMTVNAQMLQWLPIIHRIYLFLPISQAVVLLGYFETNQVLYKVLRVSFYPIQYTL
RVYCTFGLNKQRPNVESGIGRWLPNILDCLPFIIASHLFGALWYGFAVDREIHCWREASF
LMPCHISDFHCHHSDVTTGVLRTCNMTHIKASCDPKDKKNFEFGIFRYALQSNFTRSAFF
PRKFLQSFWWGLRNLSSFGSNLETSSNMLEICFSILTSISGLVLFLIYLNARVEESQKRS
DRIKLRLKMQTVNPDIDMWLNKYNLSGQNKKLMKKVIMKNVRQKLEENKDVDVQNLYSLL
PTVYRRQIMSLSGLACLQKVAMFKYMKIRVLKAIVKHLELVTYTKNCYIIREGEPLWNVI
FITQGTALSYKTSNNVNIGGTVSNSSIIKCLKKDDFFGDELLDWAFVFASISDLPVSPKT
VMSQTRVEAFAINASNLRRVVSKFRLHFILNLPDLKHSPLERMAATSLQTAWRERENHSS
GWNKLKELLNYSSESD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccagcatccgagtgaagtagcaattgacttaagtacttcacatcgaagttta
acgagggagtccgaccaagaatataaaggcgaactgtggcaaatattatcagagaaaata
cttgatccaagtgattctgagccaacgagatattttccaatatgggaagataagatattt
ctaatatgttgtgcatttgctgtcctctataatcctttgttcatgtaccttcctgtaatt
tatcctcaaaaactgtgcttcgaatgggatgtgagcttgatgtggatatatgttggtttg
caatcagccattgatatgttttacgccatggatatttttattttttcttggcgaattcgt
ggtgagcgtaatgctaaaatgacagttaatgcacaaatgcttcaatggttacctattata
catcgcatttatctatttcttcccatttcacaggcagtagtgctcctaggatattttgaa
accaatcaagttttgtataaagttcttcgagtttccttctatccaatccaatatactcta
cgggtttattgcacttttggattgaataagcaacgtcctaacgtagaatctggaatagga
agatggcttccaaatatattggattgtcttccgtttatcattgcttctcatttatttgga
gccttgtggtacggttttgccgttgacagagagatacactgttggagggaggcctctttt
cttatgccatgtcatatatcagatttccactgtcatcatagcgatgtaacaaccggagta
cttagaacctgcaacatgacacatataaaggcatcatgtgatccaaaggataaaaaaaat
ttcgagtttggtatatttcgttatgctcttcagtctaactttacaagatcagcatttttc
cctcggaagttcctgcaatctttttggtggggcttgcgcaatttgagttcctttggttca
aacttggagaccagttccaatatgttggaaatttgcttctcaattttaacttctataagt
ggtttggtgctgttcttaatatatctcaatgcaagggtggaggagtcacagaaaagatca
gatcgaattaaattaagactaaagatgcaaacggtgaatccagacatagatatgtggtta
aataaatacaatctttctggacaaaataagaagttgatgaagaaggtgatcatgaaaaac
gttcgacaaaagcttgaagaaaacaaagacgttgatgtgcagaatttgtactctcttctt
cctacagtatacagaagacaaatcatgagtctttccggcttggcttgtttacagaaagta
gcgatgttcaaatatatgaagatacgagttttgaaagcaattgttaaacatcttgagcta
gtgacatatacaaaaaactgctatattattcgggagggggaaccactttggaatgtgatc
ttcatcacgcaaggcactgcattgagctacaaaaccagtaataatgtcaatattggcgga
actgtaagcaattcctcaatcattaagtgccttaagaaagatgatttctttggagacgaa
cttttagattgggcattcgtatttgcctccatatctgatttgcctgtctctcccaaaact
gtcatgtctcaaactagagtagaagcatttgctatcaatgccagcaatcttaggagagtc
gtctcaaaattccggttgcattttattctgaacctgcctgacctaaagcattctccattg
gagcgtatggcagctacttccttacaaacagcgtggcgtgaaagagaaaatcacagcagt
ggatggaacaaattgaaggaattactcaactattcatcagaaagtgactga
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