Rosa chinensis (China rose): 112176073
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Entry
112176073 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112176073
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rcn03037
]
112176073
Cilium and associated proteins [BR:
rcn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112176073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
DUF6169
Motif
Other DBs
NCBI-GeneID:
112176073
NCBI-ProteinID:
XP_024169658
LinkDB
All DBs
Position
7:3660802..3670530
Genome browser
AA seq
1685 aa
AA seq
DB search
MENIGEALDDDGAGWFEVKKKQRSSSKLSLQSWVGGSSGKNANSSSGHSLSIENSRNYFG
KRRSQLPKVGGNSAVHSQGSGASTIPTPNKSKMGVPCDIGIDKQCAKCPMSSPSFITNPD
GETRDLEKIPARDNSEVVHKIKWGDLEDDGLALPLTNVVGTRIKFGAIGDENLVASKEHE
NCHSFVPSANSQENKLFAASADANSVSHQTASVNDKDQLYEDNCKEVDIISAENVEEPIQ
NDKMVDVDNNTSNCKAIHTENIEAVADDPVSASTLACEEGGTVGKVEAPVVVTVVSNPAI
FEESGPDGSSSEVHISKDKDLVPPDKSNPEICAEPTLTPSGHYMLNSNMSALGDCDTGES
KERFRQRLWCFLFENLNRAVDELYLLCELECDVEQMKEAILVLEEARSDFRDLNTRVEDF
EKIKRAPSQLIDGVPITLKSDHRRPHALSWEVRRMTTSAHKAEILSSSLEAFKKIQKERA
SFCAANDAKLMGLKYTNIQSSDNLNTLPARNDGKLNSKESTMKLRRYSGGSDLIEAVTNG
NKNTESSSLSRVKLVQNGRVSQNSSSFVVNASRLPPRDNSAAGKTKREQSGSEAEKMLAR
KEKLSTEGGVEKIAKLTNQSKKQIPLLEKDKEKRNSAPWKSMDAWKEKRNWEDVLSSPSR
VSSRVSHSPGLRRKSADRARMLHDKLMSPEKKKKTSLDLKREAEEKHARAMRIRSELENE
RAQKLHRSSEKMNRVNELQAVKNMKLREGMHARHQRSESRHEAHLAQRVKRAGDESIKVK
EVQFITSLNEENKKLSLRQKHHDSELRRAEKLQVIRTKQKEDMAREEAVLERRKLIEAEK
LQRLAETQRRKEEAQVRREEERKASSAAREARAIEQLRRKEERAKAQQEEAELLAQKLAE
RLRESEQRRKFYLEQIRERASMDFRDQSSPLLRRTLNKDVQGRSSSINNGDDYQVSSFSG
LGSCTFAESNNTAQHSMKRRIKKIRQRLMALKYEILEPPVGAENAGIGYRTALGTARAKI
GRWLQELQRLRQARKEGAASIGLITAEMIKYLEGKELELQASRQAGLIDFIASALPASYT
SKPEACQVTIHLLKLLRVVLSLPTNRSYFLAQNLLPPIIPMLSAALESYIKIAVSLNPSG
NVNFPSTKTSVENFESISEVLDGYLWTVTTIVSHISSDERQLQMRDSLLELLIAYQVIHR
LRDLFALYDRPQVEGSPFPSSIILSINLLVVLTSRSETDCPIDWKEVPIETLLGNGSEEA
KIAECDNSECLPSTQTLEDFRPPSSLVNGGKFVHLPDVPEDGPVDEMCKINESVESVAAA
KNSEKEQSNSLVEANNANTFKTGVPDEPQKMLNEDIMKPFASVEEEKHLVDTGAEHKYDN
SMSLQQPVAFLLSAVSETGLVSLPSLLTSVLLQANNRLSSEQASDSLPSNFEDVATGVLK
VLNNLALLDLKFMQRMLARPDLKMEFFHLMSFLLSHCASKWKVANDQVGLLLLESLLLLG
HFALFHLGNQAVLRWGKSPTIIHKVCDLPFVFFSDPELMPVLAGTLVAACYGCEQNKGVV
QQEMSTDMLLSLLQSCRNVLPAVRSNSKLDSGPADDVPLRSGRNSTKNSRVSSGKGVASG
NSMRIGKMRSHRESKTIRSYEELAPKQILPSTDTASMMLHCRFPNSFIDRAENFFSTENP
SIAGV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggagaatattggagaagctctagatgatgatggcgctggatggttcgaagtgaaaaag
aaacagagaagtagctcaaagttgtctctacagagttgggttgggggaagttctgggaag
aatgctaactcttcgagtggtcactccttatcaattgagaacagtaggaattattttggc
aagcgcagatcccagcttccaaaagtagggggaaatagtgctgtacatagccaaggaagt
ggtgcaagcaccattcctacgccaaataagagtaaaatgggtgttccctgtgatattggc
attgacaagcaatgtgctaaatgtcccatgtcatctccttcatttattacaaatcctgat
ggtgaaactagagatctagagaagatccctgcaagagataactctgaagtggttcataaa
attaagtggggggatctagaggatgatggtttggcacttcctcttactaacgttgtcggc
accagaatcaagtttggtgctattggagatgaaaatctggtggcctccaaagagcatgag
aattgtcatagttttgtcccttctgcaaattcacaagaaaacaaactgtttgctgcatct
gcggatgccaatagtgtttctcaccagacggcgtcagtgaatgataaggatcaattgtat
gaagataactgcaaggaggtggatattatatctgctgaaaatgttgaggagccaattcag
aatgacaaaatggttgatgtggataacaatacttcaaattgcaaggctatacataccgaa
aacattgaagcagtcgctgatgatcctgtaagtgctagcactttggcttgtgaagagggt
gggacagtggggaaagttgaagcacctgtggttgtaactgtggtaagtaatcctgcaatt
tttgaagaatcaggccccgatggcagttcaagtgaagttcatatctccaaagataaagac
ttagttccacctgacaagagcaacccagaaatttgtgcagagcctaccctcacaccatct
ggacattatatgttgaactcaaatatgagtgcccttggagattgtgacacaggtgaaagc
aaagaaaggtttaggcagcgactttggtgctttctctttgagaatcttaaccgggctgtg
gatgagctttatcttctttgtgaactagagtgcgatgtagagcagatgaaagaggccatt
cttgttcttgaagaggctcgctctgatttcagagatctgaatactagagtggaagatttt
gagaaaataaaaagggcaccatctcagttgatagatggggtgcccatcaccttgaagagt
gaccatcgtaggccacatgctctttcatgggaggttagaagaatgacaacttctgcacac
aaagcagagatactatcctcatctcttgaggcttttaagaaaattcagaaagaaagagct
agcttttgtgcagccaatgatgctaaacttatgggccttaagtacacaaatatccaatct
agtgataacctcaatacgttacctgcaagaaatgatgggaaattaaattctaaagaatca
acaatgaagttaagaagatatagtggaggttcagatctcattgaagccgtcactaatggg
aataagaatactgaatcaagcagtttgagcagagtaaagttggtacaaaatgggcgtgtc
tctcagaattcatcttcctttgttgttaatgcatctagattgcctcctagggacaattct
gctgctggaaaaactaagagagaacagtctgggtctgaagccgagaagatgcttgctagg
aaagaaaaactgtcaacagaaggtggtgttgaaaaaattgccaagttgaccaatcagtcc
aaaaagcaaattccacttttggaaaaagataaagaaaagaggaattcagctccatggaaa
tccatggatgcttggaaggagaagaggaattgggaggatgttctttcatctccttctcgt
gtctcttcccgagtttcacattcgcctggcttgaggaggaaaagtgctgatcgtgcacga
atgttgcatgataaactaatgtctcctgagaagaagaaaaaaactagtttggatctgaag
agagaggcagaagaaaaacatgcccgtgctatgagaatcagaagcgagctagagaatgag
agagctcagaagcttcatcgtagttcagaaaagatgaatagagttaatgaattacaggct
gtaaaaaatatgaagttacgggagggaatgcatgctcgtcatcaacgcagtgagtctcga
cacgaagcacatctagctcaacgagtgaagagagctggtgatgaaagcatcaaagttaaa
gaggttcagttcataacttccttaaatgaagaaaataaaaagctcagtttgcgccagaag
catcatgattcagaactgaggagagctgaaaaacttcaagtgataagaactaaacaaaaa
gaggatatggcgcgagaagaagctgttttagagcggaggaaactcattgaagctgaaaag
ttgcagcgtcttgctgaaacacagcggagaaaggaagaggctcaagttagaagggaggag
gagcgtaaagcatcaagtgcagcacgtgaagcaagggccatcgaacaacttcggaggaag
gaggaaagagccaaagcccagcaggaggaggctgaactgctggcccagaaattggctgag
agactaagagaaagtgagcaacgccgcaaattttacctggaacagatacgagagagagct
tctatggatttcagggatcaatcttcacctttattacgtcgaactttaaacaaggatgtt
cagggaagatcatcatcaattaacaatggcgatgattatcaagtaagcagtttctcaggc
ctaggaagttgcacttttgcggaaagcaataatacagcacaacattcaatgaagcggaga
attaaaaaaattcgacagagacttatggctctaaaatatgaaattcttgagcctcctgtt
ggtgctgaaaatgctggcattggatacagaacagcactgggaactgcaagggcaaagatt
gggagatggcttcaagaacttcaaagactccgacaagcaagaaaagaaggggctgcaagc
attgggttaataactgctgaaatgatcaagtatttggagggaaaggagctggaactgcag
gcttcccgccaagctggtctgattgattttatcgcttctgccctgcctgcttcttataca
tcaaaacctgaagcctgccaggtgacaatacatcttttaaaactcttaagggtggtgtta
tctctgcctacaaacaggagttattttcttgcacagaatctcttgccccctatcatccca
atgctgtctgctgcccttgagagctacataaagatagcagtatccttgaatccttctggt
aatgttaatttcccatctaccaaaacctcagttgaaaattttgaatcaatatctgaggtg
ttggatggttatttatggactgtaacaacaatagtcagtcacataagttctgatgaacga
cagctccaaatgagggatagtttgttggagctactgattgcctaccaagttattcaccgg
ctgcgagatctctttgccctttatgatcgaccccaggtggaggggtcaccatttccatcg
tcaattatcttaagtataaatttgttggttgtcttaacttccaggtctgaaactgattgt
cctattgattggaaagaagtacctattgaaacactgcttggaaatggaagtgaagaggct
aagattgctgagtgtgataattcggaatgtcttccttcaactcagaccttggaagatttt
aggcctccatcatcattggtgaatggtggtaaatttgtacatctcccagatgtaccagag
gatggaccagtagatgagatgtgtaagataaatgaatctgtggagtcagtagctgctgct
aagaatagtgagaaagagcagtctaatagtctggttgaagcaaacaatgctaacaccttc
aaaacaggtgttccagatgaaccccagaagatgctgaatgaggatattatgaagcctttt
gcatcagtggaggaagagaaacacttggtggatactggtgcggaacataagtatgataac
agtatgagcttgcagcaaccggtagcatttcttctttcagctgtatcagagacagggctt
gtcagtctcccatctctgttgacatctgtgttattacaggcaaacaatagattgtcttct
gaacaggcctcagattccctcccatctaattttgaagatgtagcaactggagtactgaag
gtgttgaacaatttggctcttttggaccttaaattcatgcagagaatgctagctaggcct
gacctaaaaatggaatttttccatttgatgagtttcctgctttctcattgtgccagcaag
tggaaagtagctaatgatcaggtggggctgcttttgcttgaatctcttttgcttcttggt
cattttgccctgttccaccttgggaatcaagctgtccttcgttggggaaagagtcctacc
attatccacaaggtatgcgatttgccatttgtattcttcagtgatcctgagttgatgcca
gtcttggctggcacgctggttgctgcctgttatgggtgtgagcagaacaagggtgtggtt
cagcaggaaatgagtacagatatgctactctccctgttacaatcttgcagaaacgtcctg
ccagcagttagatccaattctaagttggacagtggcccagcagatgatgtgcccctaaga
tccggccgtaacagtaccaagaactctagggtttcttccggaaagggtgttgcttcagga
aacagcatgagaattggcaagatgagaagccatagggaaagtaaaacaattaggagttat
gaagagttggctccgaagcagattcttccatctacagacactgcctctatgatgctgcat
tgtagatttccgaacagcttcatcgatagagcagaaaatttcttttcaactgagaacccc
agcatcgctggagtatga
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integrated database retrieval system
