Rosa chinensis (China rose): 112176297
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Entry
112176297 CDS
T06020
Name
(RefSeq) YTH domain-containing protein ECT3 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112176297
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112176297
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
112176297
NCBI-ProteinID:
XP_024169906
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All DBs
Position
7:47259858..47265646
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AA seq
562 aa
AA seq
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MAGEKKIEKAEPVATVLASDSVSGLGEQQRVSGKDGIPYDSISSMSSSRDATDSMKGETD
QESVGEHGVYYPPTSCYNYYYPGYNGSYTQMDEHRYANANNSQAGVQSDNGSMVYYLPGY
NPYAPGTLMGVDGQGVGQQQYFSSSGYMQPPSYGSEAMPCYPWDTTYSGDISTATNSGFG
NLKSGPGGTALSRSSGFMSGKTNGNLASKFSKSFPSTQPIKSLNKVPHLGSDFSASLLKG
YPSAGRFSSFTNQKGLFPLNGQTNYKSNGRILNGNDRFKSREKYNRNEDFESSTELTRGP
RSRNKITPSDSSVEKEVLGFTVSRDKYNLPDFRTDYESAKFYVIKSYSEDDVHKSIKYDV
WASTPNGNKKLDVAFRDAEAKSSETGTRCPIFLFFSVNGSGQFVGLAEMIGEVDFNKDMD
FWQVDKWSGFFPVKWHIIKDIPNTQLRHIILENNDNRPVTFTRDTQEIGLKQGLEMLNIF
KTYAPRSSLLDDFNFYENREKSLQAKRSSKPATLKIETYDDGVIPEHMSAVGEDLEAESG
GIGMTSDRTSLISLTKNLSLNA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaaaagaagattgagaaagctgagcctgtagccactgtgttggcatcagat
tctgtttccggattaggagagcaacagcgggtttctgggaaagatggaataccatatgat
tcgatctcctccatgtcttcttcgagggatgccaccgacagcatgaaaggtgagactgat
caagagtcggttggagagcatggtgtttactatccacccactagctgttacaattattat
tatccaggatataatggatcctatacgcagatggacgaacatcgctatgctaatgctaat
aattcacaggcgggtgtgcagtcagacaatggttcaatggtctattatctccccggctat
aatccatatgcccctggaactcttatgggtgttgatggccaaggtgttggtcaacagcag
tatttttcttcctcaggttatatgcagccaccttcgtatggttctgaagctatgccttgt
tatccatgggacacaacatattctggtgatatctctacagcaacaaactctggttttgga
aatctaaagtctggaccaggtggtactgctttatctaggtcaagtggctttatgtcgggc
aaaacaaatggaaatcttgctagcaaattttccaagtctttcccttctacacaacccatc
aaatcattaaacaaggtgcctcatttaggttctgatttctcagccagtcttttgaaggga
tacccctcagctggaaggttctcatcattcactaaccagaagggtttgtttcctcttaat
ggtcaaacaaactacaaatctaatgggaggatattaaatggaaacgacagattcaagtca
agggaaaaatataacagaaatgaggattttgaatcctcaactgagttgacacgtggtcca
agatctcgcaacaagattactccttcagactcatcagttgagaaggaagtattgggattt
acagtcagtagagataaatacaacctaccagattttcggactgattatgaaagtgcgaag
ttctatgtcattaagtcttacagtgaagatgatgtccataagagcattaaatatgatgtt
tgggccagcactccgaatggcaataagaaactggatgtagcatttcgtgatgctgaagca
aaatcgagtgagacaggcacgcggtgtcctatattcctatttttctcggtgaatggaagt
gggcagtttgtaggcctggccgagatgattggggaggtagatttcaacaaagatatggac
ttctggcaagttgacaagtggagtgggttcttcccagttaaatggcatataataaaggac
atacctaacactcagttgcggcatattatccttgaaaacaatgataacagacctgtaact
tttacccgggacactcaagagattggactgaagcaaggtttggaaatgctgaacatattc
aaaacttatgcacccagatcatctttgttagatgacttcaatttctatgaaaatcgagaa
aagtctctacaagccaaaaggagcagtaaacctgcaactttaaagattgaaacttacgat
gatggtgttatccctgagcatatgagtgccgtaggggaagaccttgaagctgaatcaggt
gggatcgggatgacttctgaccgaacatctctcatttcacttactaaaaatctctctctc
aatgcttga
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