Rosa chinensis (China rose): 112176313
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Entry
112176313 CDS
T06020
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcn01002
]
112176313
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112176313
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112176313
Peptidases and inhibitors [BR:
rcn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112176313
Ubiquitin system [BR:
rcn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112176313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
112176313
NCBI-ProteinID:
XP_024169931
LinkDB
All DBs
Position
7:complement(61640811..61648926)
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AA seq
1140 aa
AA seq
DB search
MHVSVDLGFRSLVVVACILLPVIGFFVARHKWRVAAARSQEIKRLLVLASQEAARAEFEV
TTGYDVVFAPEKRDSYCAVCYCPTTTRCARCKAVRYCSGKCQIVHWRQGHRYNCQPARIV
DTNVDGENDEGLKVTKKNLETNADKFEASQSTEKFSEEPAVPNPGCPPEVQCVKDDDSED
EYLADRKDTNSPSGSSATSFSGFSTSTNSSGSSDDVSVSESVSSFEPDRADAHQSANDTL
DMLQTSFNLEQIDQSRPLSPKFASLVDSVDGFAKPSKSNQVKPSCNNGETEQISNTSSGV
NHNGTREGPATESCTASSDFWGRALDSFESESDDHVSGSCVASKSKIAPSGSSLHISFDS
STALPQHTVDSESSGSILDDALPDSSGPNKSVFGAELLVKTSGDVSKVRNSPSLNFDGLN
NDDGGPSSDSHAFNFRETKSMPFSSSYDHKSLSSKRVSSTDALHSSRVVPTSSERLNHNV
NNCSRTLKSREADCQSSTVSDACLASGGRGSSVPSVKSGNGHSVEASDTGSSQVTKSSND
KTGSKTSVFKVFDQFRGPKISKHYPLGVGSEIAGKHAEKELFPYEVFVKLYNWNKVELQP
SGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKFCANKEWCFMCEFECLILKAKEGK
SPLSPSGILSQLRNIGSQLGNGREEDAHEFLRYAIDTMQSVCLMEAGVNASRSLKEETTL
IGLTFGGYLRSKIKCTRCQGKSERQERMMDLTVEIEGDIGTLEEALRQFTGTEVLDGENK
YQCGRCKSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKINKPVRFPEILDLAPYMSGTS
DKLPIYKLYGVVVHLDVMNAAFSGHYVCYVKNLQNKWFKIDDSTVTAVELENVLAKGAYM
LLYSRCSARAPRLIRNRIISSDPKHRAFPAWISGKSTNLKSKSFSTHPSGAQFPTSNPPE
NSTSYPPLQRISEEDSSSDNSSLISSRSDGGSSSTDSTRYSTSTDDFSDYLFGDSGRGWS
SPWGNFSDSDTSSSSSSSPLSSKHSPLSDSNRYASSSSETTGLWDGRPIGDSRGFADSDG
KVSGPILNSDITKQCRKVASSSSSSSSRYRETDSERLGLDSLSNVKFRKSNEQQAFDYHS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtatcggtggatctagggtttcggagcctggtagtggtggcctgcatcctgctg
ccggtgatcggattcttcgtcgctcgccacaaatggcgcgtcgccgcggccagaagtcag
gagatcaagaggctgttggtgttggcatcacaggaagctgctagagccgagtttgaggtc
actactggttacgacgtcgtttttgctcctgagaagagggattcatattgcgccgtctgc
tactgccccaccaccacccgctgtgcccgctgcaaggccgtccggtactgttctgggaaa
tgtcaaattgttcactggcgacaaggtcacaggtataattgccagcctgcacgcatagtt
gatacaaatgttgatggggaaaatgatgaaggcctgaaggtgaccaagaaaaatcttgaa
actaatgctgacaagtttgaagctagccagtcaactgaaaaattctccgaggaacctgca
gttcctaatcctggttgccctcccgaggttcagtgtgtaaaggatgatgatagtgaagat
gaatatcttgccgatagaaaagatacaaattctccttctggatcatcagctacctctttt
tctggattttccacttctacaaacagtagtggatcttcagacgatgtttctgtcagtgaa
agtgttagttcatttgaacctgacagagcagatgcacaccaatctgctaatgataccctt
gacatgctgcagacttcctttaatctggagcaaatcgatcaatctaggccattatcccca
aagtttgctagcttggttgattctgttgatggatttgcaaaaccaagtaagtcaaatcag
gttaaacctagttgcaataatggggagactgagcagatatcaaacacttcttcaggtgtg
aaccataatggcacgagggagggtccagctaccgagtcttgtacagcatcttctgatttc
tggggaagagctctcgattcttttgagtctgagagtgatgatcatgtgtccggttcctgt
gtagctagtaaaagcaagattgctccttctggatcctccttacacatttcatttgattca
tccactgctctgccccagcatacagtagactctgagtcaagtggcagtatattggatgat
gctcttccagattcttcagggcccaataagtctgtatttggggctgagttattggtgaag
actagtggagatgtttcaaaggtcaggaactccccatccctgaactttgatgggttgaat
aatgatgatggtggacctagcagtgattcacatgccttcaacttcagagaaactaaatcc
atgccattctcctcttcttatgatcataaatctcttagcagtaaaagagtttcaagtaca
gatgctttgcattctagtagagtggtgcctacaagttcagaaaggttgaatcataatgtt
aataactgcagtagaactttgaagtctagagaagctgattgtcagtcatccactgtttct
gatgcttgtcttgcatctggtggtagaggctcctcagtaccaagtgtaaaatctggaaat
ggtcattctgttgaggctagtgatactggttcatctcaggttacaaaatcttcaaatgat
aagactggctcgaagacctctgtatttaaagttttcgatcagtttagaggacctaaaatt
tcaaagcactatcctttgggagttgggagtgaaattgcaggaaaacatgctgagaaggag
ctctttccgtatgaagtatttgtcaagctttacaattggaacaaggtggaattgcaacct
tctggccttataaattgtggtaacagctgctatgccaatgcagtcctccaatgcttggca
tttactccccctctgactgcttatttgcttcagggactccattctaaattttgtgcaaac
aaggaatggtgtttcatgtgtgagtttgaatgtttaattttgaaggcaaaggaagggaag
tctccactgtctcctagtggaatactttcccagttaagaaatatcggaagtcaacttggt
aatgggagagaagaagatgctcatgaatttctaagatatgctattgacacaatgcaatcc
gtttgccttatggaggctggggttaatgcttcgcggtctttgaaagaggaaacaacttta
ataggccttacctttggaggctaccttcgatcgaagataaaatgcacaaggtgccaaggc
aagtctgagcggcaagaaagaatgatggatcttactgttgaaatcgagggcgacatagga
accctggaagaggctcttcggcaatttactggcactgaggtcttggatggtgaaaataaa
taccaatgtggcagatgcaaatcttatgagaaggccaaaaagaagttgacaatactggaa
gctcccaatgtccttactattgcattgaagcgatttcagtcagggaaatttgggaagatc
aataagcctgtacggtttcctgaaattctggacttggcaccttacatgagtggtacaagt
gataaattacccatatacaagctttatggggtggttgttcacttggatgtcatgaatgcc
gcattttctggtcattatgtgtgctatgttaagaacttgcagaacaagtggttcaagatt
gatgatagcacggtaactgctgtggaacttgaaaatgtcttggcaaaaggggcgtacatg
cttctttattcaaggtgttcggcaagagccccaagattaataaggaacagaataatatct
tctgatcccaaacatagagcctttcctgcatggatcagtggaaagagtaccaatttgaaa
tcaaaatccttttccacacatccaagtggtgctcaattcccaacttctaatcctccagag
aattccaccagttatccaccattgcaaaggatttcagaagaggactcatcaagtgacaat
tcttcccttatcagcagccgctctgatggaggttcttctagtactgatagcactaggtat
tctaccagcaccgatgacttctccgattatttattcggtgattcaggacgtgggtggagt
agcccttggggaaatttttcggattctgacacttcttcctcatcctcttcctcacccttg
agttcgaagcactcgccgctctctgattcaaaccggtacgcatcaagttccagcgaaacc
acaggtctttgggatggtcgacctattggggatagccgtgggttcgcagattcagatggc
aaagtgagtggtcctattttgaattctgacatcactaaacagtgtagaaaggtagccagt
agtagtagtagcagcagcagtagatatagggaaaccgactctgagagattaggacttgat
tctttaagcaatgtaaaatttagaaaatcaaatgaacagcaggcttttgattatcacagt
taa
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