Rosa chinensis (China rose): 112176321
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Entry
112176321 CDS
T06020
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112176321
Spliceosome [BR:
rcn03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112176321
Other components
Complex C specific factors
112176321
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
112176321
NCBI-ProteinID:
XP_024169943
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All DBs
Position
7:36586397..36589719
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AA seq
874 aa
AA seq
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MDDYQEMERFGMENDYEDLQWIGGEAYYRNRKSKRVQTKDDALYGSFADSDDDEDDGSRK
RRKERKADFTKPVSFVSTGVVVPNQEAENDLKQQSDDSRPDIDPAAISGSGLGFNNSGLG
FNNSGLGFGNTGGLGFNHSVGNDDEEDDSSFLPSAFGKKIKEGAERRHKEKEKMKLQQQS
SRSQRDLESKGAISGGDGDLGAFEKHTKGIGMKMLAKMGYKGGGLGKNQQGILAPIEAKL
RPKNMGMGFNDYKETKQPSVQELDEEKPKKQLPAATATTKKRNSWKKMVAGRTNKERYIS
AKELLAKKEEEGAEVFVQKVVDMRGPQVRVLTNLENLNAEEKAREENVPMPELQHNLRLI
LDMAELDIQKIDRDLRNERETAISLNQEKERLEAEVTMQKQHLDSLDDITTVLDRLGEEK
AMGILTLDSLAKSFSDLQRRYADDYKLCNLACIACSFALPLFIRMFQGWDPLRNPSHGMD
VVSTWKALLHGEGEYERCLDIWDSSMSPYTQLVSEVVVPAVRIAGVNTWQPKDPEPMLRF
LESWEKLLPAPVLNSIVDMVVFPKLKEAVDFWEPHRDTVPIHVWVHPWLPLLGHKLEEVY
HTIRYKLSNVLGAWHPSDGSAYTILSPWKKVFDSASWEQLMHRFIVPKLQLVLQDFQVNP
ADQRLDQFNWVMSWASAIPIHLMVDMLEKFFFPKWLHVLYHWLISNPNFEEVLNWYKGWK
ELISEELHANESIRYQLNCGLDMMNRAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAA
AAHANLGGAAHIDGGSHEMTLKDVIEAHAQQNGLLFRPKPTRTHNGHQIYGFGNVSIIVD
SLNQKVYAQTEDTWSLVSLEKLLDLHNTSLTRRR
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggagaggttcggaatggagaacgattacgaggacctccag
tggatcggtggcgaggcctattaccgaaaccgcaagagtaagcgcgtgcagaccaaagac
gatgctctctacggctcgttcgctgattccgatgacgatgaagacgacggctccaggaaa
cgtcgcaaagagcgaaaggccgacttcacaaagcccgtcagttttgtctccaccggcgtc
gtcgtccccaaccaggaagccgagaacgatttaaagcagcagagcgatgatagtaggcct
gatattgatcctgctgctatttcaggttctggtctaggcttcaataattctggtctaggg
ttcaataattctggtttaggattcggtaatactggtggtttaggattcaatcattcagta
ggcaatgatgatgaggaagatgacagcagttttctgccgtcggccttcgggaagaagata
aaggagggagctgagaggagacacaaggagaaagaaaagatgaaattgcagcagcagagt
agtcggtctcaaagagatttggaatctaaaggagcaatcagcggcggggatggggatttg
ggggcctttgagaaacacacaaaaggcattgggatgaagatgcttgcaaaaatgggatac
aaaggaggtggtcttgggaagaaccagcaaggaattcttgcccccattgaagccaagttg
aggccaaaaaacatgggtatgggttttaatgattacaaggaaaccaaacagcccagtgtg
caagaattggatgaggaaaagcccaagaagcagttgccggctgctactgccaccaccaaa
aagaggaattcctggaagaagatggttgccggcaggactaacaaggagcggtatatatct
gccaaggagttgttagccaagaaagaagaagaaggtgccgaggtctttgtgcagaaggtg
gttgatatgcggggacctcaagtacgagttttgaccaatttggagaatttgaatgctgag
gagaaggctagggaagaaaatgttcccatgcctgagctacagcacaacttgaggttgatt
cttgacatggctgagcttgacatccaaaagattgatagggatttgaggaatgagagagag
actgctataagcttgaaccaggagaaagagagattggaagctgaggtgactatgcagaag
cagcacttggatagcttggatgatatcacaactgtgttggaccgactgggagaagagaaa
gccatgggaatattgacgctggattctctggcaaagagtttcagtgacctgcagaggagg
tatgccgatgactacaagttatgtaacttggcttgcattgcctgttcctttgcactccct
ttgtttatcaggatgtttcaaggttgggatcctcttcggaacccctctcatggaatggac
gtggtatccacctggaaggctttacttcatggggagggggagtatgagcggtgccttgat
atatgggattcttcaatgtctccttatacccaattggtttccgaggttgtggtaccagct
gtgaggattgctggagtaaatacttggcagcctaaggaccctgaacccatgcttcgtttt
ttggagtcttgggagaaattgctgccggctcctgttcttaatagcatagtggatatggta
gtcttccccaaattgaaggaggcagtagacttttgggaacctcaccgggacacagttccc
atccatgtctgggtgcatccatggctaccactattaggacacaagttggaggaggtgtac
cacacaatacgctacaagttgagtaatgttctaggtgcatggcaccccagtgatggatct
gcttatacgatactctctccttggaaaaaggttttcgattctgcaagttgggaacagcta
atgcatcgatttatagtacccaaattgcagcttgttttgcaagacttccaagtaaaccct
gcagatcagagacttgatcagtttaattgggtcatgagttgggcttctgctattccaatt
catctaatggtagatatgttggagaagtttttcttccccaagtggctacatgttttatat
cactggttaatatcaaacccgaactttgaagaggttttgaattggtataaaggttggaag
gaacttatatctgaagagcttcacgcaaatgaaagtatccgctatcagcttaattgtggc
cttgacatgatgaatcgtgctgttgagggtatggaggtggttcaacctggtttgaaagag
aatattagctacctcagggtgcttgagcaaaggcaatttgaggcacagcaaaaagcagca
gcggcccatgcaaatttgggtggcgcagcccatattgatggtggtagtcacgagatgacc
ctgaaagatgttattgaagcccatgcacagcagaatgggttgctatttaggcctaagcct
actaggacgcataatggccaccagatatacgggtttggtaatgtaagcataatagttgac
tctctaaatcaaaaggtgtatgcccaaacagaggacacttggtcccttgtatcccttgag
aagttgcttgacctgcacaatacttctcttacaagaagacgctga
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