KEGG   Rosa chinensis (China rose): 112176361
Entry
112176361         CDS       T06020                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rcn03036]
    112176361
Enzymes [BR:rcn01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112176361
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     112176361
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 112176361
NCBI-ProteinID: XP_024170003
LinkDB
Position
7:4097824..4102642
AA seq 661 aa
MEVGGGVDSESKSQRRVGLLYDERMCKHSTPDGDPHPENPDRIKVIWNKFQANSIPQRCV
LLDAKEAEDKHILAVHSQKHVNLIKKISSKQFDSRRNRIASSLNSIYLNEGTSEAAYLAA
GSAIEVTERVAKGEVDSAVAIIRPPGHHAEEDEAMGFCLFNNVAIAASYVLNEKPELGIN
KILIVDWDVHHGNATQKMFWKDPRVLFFSVHRHEFGSFYPATDDGFYTMVGEGPGAGYNI
NVPWENGRCGDADYFAVWEHILLPVAKEFNPNLIIVSAGFDAAIGDPLGGCRITPYGYSV
MLKKLMNFANGKIVLALEGGYNFESIAKSMLACVEVLLEDKPILGSSEAYPFESTWRVIQ
AVRQKLSAYWPSLADELPEELINQKVAPAVYVLTSSSDSEAEEDHESPKVSQHLEEALQE
IIEPLSKLKVDESTRDHVASNSYTWRSELSKVDIWYAAFGSNLWLKRLLCYIAGGQVDGL
QKSCVGSVDKTPPKEITWKTFPRRMFFGRESTLSWGPGGVAFMDPESNSQDKTHMCLYRI
TLEQFNDLLVQENYGGYAMSSPLFDLTALNSVTGQEPNSLQVRLEKGWYRNVVYLGKERD
IPVLTMTCTPSDVEGFKSGELPLCAPAKNYANTIVRGLVEGKQLSQEEAMAYVQEAATKA
L
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggaggttggtggtggtgttgactcggagagcaaaagtcaacggcgggtagggctgtta
tacgacgagaggatgtgtaagcactccacaccggacggtgatcctcacccggaaaaccct
gaccggattaaggtcatctggaacaaattccaagccaattccattcctcagaggtgtgtt
cttttggatgccaaagaagcagaagacaaacatatcttggcagtccactcccaaaagcat
gttaatttgatcaagaagataagctccaaacagtttgattcacggagaaatcgaattgca
tcaagtttgaattcgatatatttgaatgaaggaacatccgaagctgcctatcttgccgcc
ggctctgccatagaggtaactgaaagagttgcaaaaggagaagtggattctgctgtagct
attattaggcctccaggacatcatgccgaagaagatgaagctatggggttttgtcttttc
aacaatgtagctattgcagcaagttatgttttaaatgaaaagccagaattgggaatcaac
aaaatactgatcgttgattgggatgtgcatcacggtaatgccactcaaaagatgttctgg
aaggatcctcgtgttttattcttctcagttcataggcatgagtttggaagtttttatcca
gctactgatgatggtttctatactatggttggagaaggaccaggagcaggatataacatt
aatgtcccttgggaaaatggtcgatgtggagatgctgattattttgcggtttgggagcat
atcttgcttccagttgccaaagaattcaatcccaacttaattatagtctctgctggattt
gatgcagctattggtgatcctttggggggttgtcggatcacaccatatggatattcagtt
atgctgaagaagttgatgaattttgccaatggaaagatcgtcttggctttagaaggagga
tataattttgagtctatagcaaagtcaatgcttgcttgtgttgaagttctgctagaggac
aaacctattcttggatcttcggaggcatacccatttgagtctacatggcgtgtgatacaa
gcggttcgccagaaattaagtgcttactggccgtcacttgcagatgaattgccagaggag
ttaatcaatcaaaaagtggctccagctgtgtatgttctgacctcaagctctgactctgaa
gcggaggaggatcacgaaagtccaaaagtatctcagcatcttgaggaagctcttcaggag
attatagagcccctttcaaagctgaaagttgatgaaagtactcgggatcatgtggcaagc
aactcttacacatggaggtcggagctttcgaaagttgacatctggtatgctgcgtttgga
tcaaatctgtggttgaaaagactgctttgctatattgcaggtggacaggtggacggtttg
caaaagtcatgtgttggttcggtggataaaactccaccgaaagagatcacgtggaagact
ttccctcgtcgcatgttctttggtcgcgaatctactctgtcatggggtcctggaggggtt
gcgttcatggaccctgaaagcaacagtcaggataaaactcacatgtgcctgtatagaatt
acgctcgagcagtttaacgatttgttggtgcaggaaaattatggaggctatgccatgagc
tctcctttgttcgacttgactgctttaaattcagtcacaggtcaagaacctaattccctg
caggttcgcctagagaagggttggtaccgtaatgttgtctacttgggcaaggagcgtgac
attccagtactgactatgacgtgcacaccatcggacgttgagggcttcaaatctggagag
cttcccttgtgcgctccagccaagaattatgccaacacaatagtgagaggcttggtggaa
ggaaagcagctttcacaggaggaggcaatggcttacgtacaagaagccgctactaaagca
ttatga

DBGET integrated database retrieval system