Rosa chinensis (China rose): 112176415
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Entry
112176415 CDS
T06020
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112176415
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112176415
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
RhgB_N
Motif
Other DBs
NCBI-GeneID:
112176415
NCBI-ProteinID:
XP_024170098
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All DBs
Position
7:3781683..3785372
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AA seq
678 aa
AA seq
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MRQRGGWLLWTTLVILGLLCLSVDAGNYINDTRLGPLNRTSNIPKTQDRDDAVKITYPPK
QVVLDNGLVQLTFSNPGGQITGIKYHVIDNLLKNKTTQTAYWDVMWRGQLHGFDGKEFKV
ITEREDQVEVSFISTYNPSFSNDSMIPLTVNKRYIMQRGRSGFYAYVIFQRDEGWPELAI
NDVRLTFKLNQDQFNYMAVSDTRRRFMPTADDRNLGQQLAYPEAKLLNNATSNPLFHGEV
DDKYQYSSDDKNGKVHGWISTKSSVGFWLITPSTEFRAGGPPKQDLTSHVGPTTMCVFSS
SHYATEQLCLKFKQGEAWKKVYGPVYVYLNLAGSTRDPTTTLWHDAKQQMHEEVRSWPYN
FTRCPDFPVSEQRGSVFGNLQVNDRYINSTSLVPASSAYVGLAAPGEVGSWQTESKGYQF
WTRADAKGDFVIKHVRPGNYNLYAWVPGILGDYKYEVEISIKPGSRFELDKLTYSPPRIG
PTLWEIGIPDRSAAEFYIPDPYPTLMNKLDNNNHSDASDKFRQYGIWGRYGELYPDHDLV
YTVGVSDYRHDWFYAHVTRNTGNVLVGTTWQIQFKLTNMTAPGDYKLRLALASANYAELE
VRFNKESKAPLFSTGRIGEDNAIARHGIHGLYWLFDVNVPRSQLHEGNNTLYLTQTRGGN
MFVGVMYDYIRLEGPPLR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagcgcggcggttggcttctctggacaacattggtgatacttggtctcctctgt
ctctcagttgatgctggaaactacatcaacgacacaagattgggaccgctgaacaggaca
agtaatatccccaaaacacaagatcgggacgatgcggtgaagataacatatcctcctaaa
caggttgtgttggataatggcctggtgcaactcacattttctaaccctggtggacaaatt
actggaatcaaatatcatgtaattgataacttactcaaaaacaagaccacacaaacagcg
tactgggatgtgatgtggaggggtcagcttcacggatttgacggaaaagaatttaaagtc
attacggagagggaagaccaagttgaagtttctttcatcagtacctacaatccttccttc
tctaatgactcgatgatccccttgactgtcaacaaaaggtacatcatgcagcgtggtcgt
tcggggttctatgcgtacgtcatcttccagagagatgaagggtggccggagctggcaata
aatgacgttcgactaactttcaagcttaaccaagatcaatttaactacatggcggtgtcg
gatactagaagaaggttcatgccaacagctgacgaccgaaacctaggtcagcaacttgcc
tatcctgaagctaagcttttaaacaatgcaacaagcaatcctctctttcatggcgaagtg
gatgacaagtaccagtactcaagtgatgacaaaaatggcaaagtccatggctggattagt
accaagtcatctgtgggattttggttgatcacaccaagtactgagtttcgtgctggtgga
cctccgaagcaggacctcacctcccatgtcgggccgacgacaatgtgtgtgttctctagt
agtcattacgctacagaacaactttgtttgaaattcaaacaaggtgaagcatggaaaaag
gtttatggacctgtgtatgtgtatcttaatctagctggttcaaccagggatcccactact
acactttggcacgacgctaagcaacagatgcatgaagaggtgagaagctggccttacaat
tttactcgatgcccagattttcctgtttcggagcaacgaggatcagtttttggaaattta
caagtaaatgataggtacattaacagcaccagccttgttccggcaagctcggcttatgtg
ggattggctgcacctggagaagtgggatcatggcaaacagaaagcaagggataccagttt
tggactcgagcggatgcaaaaggcgactttgtcatcaaacatgttcgacctgggaactat
aatttgtatgcatgggttcccgggattcttggagattacaaatatgaggtcgagattagt
attaaaccaggaagtcgattcgagttggataagcttacttattcgcctccaagaattggt
cctacattatgggaaatcggcatccctgatcgaagtgctgccgagttttacataccggat
ccatatccaactctcatgaacaaacttgataacaataatcactcggatgcctcggacaag
ttcaggcaatatgggatctggggacgttatggagagttataccctgaccatgatctggtc
tacactgttggtgttagcgattatcgtcatgattggttttatgctcatgtgactaggaat
acaggaaacgtcttggtcggaaccacatggcagattcaatttaagcttactaatatgaca
gctcccggagattataagctccgattggcattggcctccgccaactatgcagagttggag
gttcgatttaacaaagaaagcaaggcacctcttttctctacagggcggataggagaggac
aatgctatagcaagacatggaattcatggtttatattggttgttcgatgttaatgtacca
aggtctcaactgcatgaaggaaacaacacactctatcttactcagacaagaggcggaaat
atgttcgtaggagtcatgtatgactatatcagactagaaggacctccattgcgatga
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