Rosa chinensis (China rose): 112176478
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Entry
112176478 CDS
T06020
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00280
Valine, leucine and isoleucine degradation
rcn00650
Butanoate metabolism
rcn01100
Metabolic pathways
rcn04146
Peroxisome
Module
rcn_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
112176478
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112176478
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112176478
Enzymes [BR:
rcn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
112176478
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
112176478
NCBI-ProteinID:
XP_024170184
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Position
7:complement(36812747..36814337)
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AA seq
403 aa
AA seq
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MSSLEKPLVFDRIQEFSSSVCRSRRADDVEEGTSCSTSNSREEEYTRDYFSFSKKTLSFG
RNHKAFRNGFESWFLPDDQFNSKTKCNEKDATRKFLNRIGLPKFVKIVEVGPRDGLQNEK
KIVSAATKIELIHRLISSGLSVVEATSFVSPKWVPQLADAKDVMEAVRNLEGSATLPVLT
PNLKGFEAAIASGAKVVAVFASASESFSKANINCSIEESLVRYRAVTRAAKELSIPVRGY
VSCAIGCPEEGAIPPSKVAYVAKQLYDMGCFEISLADTTGIGTPTTVVPMLEAVMAVVPV
EKLAVHFHDTYGQSLPNILVSLQMGICTVDSSVAGLGGCPYAKGASGNVATEDVVYMLSE
LGVETNVDLAKLLVAGDFISRHLGRPSGSKIAIASSPVKADDS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcttggagaagccacttgtttttgataggattcaggaattctcttctagtgtt
tgcaggtcaagaagagcagatgatgttgaagaaggaacaagttgtagcacatccaatagc
cgcgaagaagagtatacaagagactacttctctttcagcaaaaagactttgagctttggc
aggaatcacaaggctttcagaaatggttttgaatcatggttcttgccagatgatcaattt
aactccaagaccaagtgcaatgaaaaagatgcaacacgtaagttcctgaaccgaatagga
ttaccaaagtttgttaagatagtagaagtaggtccaagagacggtctacaaaatgagaag
aagatcgtatctgcagctacaaagattgagctgattcataggctgatttcttctgggttg
tctgttgttgaggctacaagttttgtatcacccaaatgggttcctcagctagcagatgca
aaggatgtaatggaagcggttcgcaatctcgagggtagtgctacattgcctgttctgaca
cctaatttgaaaggatttgaagcagctattgcatctggtgctaaggtcgtagcagtcttt
gcatcagcttccgagtcattttcgaaggcgaacatcaattgtagcatagaagaaagtctt
gttcgttaccgagctgttactcgtgctgcaaaggagctttccattcctgttcgagggtat
gtatcatgtgccattggatgtccagaagagggagcaattcccccatcaaaagtggcatat
gtagcaaaacaactctatgacatgggctgctttgaaatttctcttgccgacacgaccgga
atcggtaccccaacgacggttgtgccaatgcttgaagctgtgatggctgttgttcctgtt
gagaagctagctgttcatttccatgacacgtacgggcaatctcttccaaatattctagtc
tctcttcaaatggggatatgcacagtcgactcctctgttgcaggtttaggtgggtgtcca
tatgccaagggcgcttcgggtaacgttgccactgaagatgttgtatacatgcttagtgaa
cttggtgtggaaaccaatgtggatttggccaagctcctggtggctggtgatttcatcagc
aggcatttaggtcgcccgtctggttcaaagatcgccattgcctcgagtcctgttaaagct
gatgactcttaa
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