Rosa chinensis (China rose): 112176485
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Entry
112176485 CDS
T06020
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112176485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112176485
03009 Ribosome biogenesis [BR:
rcn03009
]
112176485
04131 Membrane trafficking [BR:
rcn04131
]
112176485
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112176485
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112176485
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112176485
Membrane trafficking [BR:
rcn04131
]
SNARE
SNARE associated proteins
Others
112176485
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112176485
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112176485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
Viral_helicase1
ABC_tran
IstB_IS21
Vps4_C
NACHT
AAA_7
AAA_lid_PRS2_C
NB-ARC
TsaE
Zeta_toxin
ResIII
AAA_24
DUF815
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
112176485
NCBI-ProteinID:
XP_024170193
LinkDB
All DBs
Position
7:complement(11481446..11485741)
Genome browser
AA seq
809 aa
AA seq
DB search
MVDPSSSAPNPDPKTKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQFFR
GDTVLIKGKKRKDTVCIVLADEQCEEPKIRMNKVVRANLRVRLGDVVSVHTCPDVKYGKR
VHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEY
CVVAPDTEIFCEGEPVKREDEEKLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG
VKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAE
KNAPSIIFIDELDSIAPKREKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSID
PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAAL
CTEAALQCIREKMDVIDLEDEEIDAEVLNSMAVTNEHFQTALGASNPSALRETVVEVPNV
SWDAIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSSGDAG
GAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRL
QIFKACLRKSPVSKDVDLAVLAHHTHGFSGADITEICQRACKYAIRENIEKDIEKERRRA
ENPEAMEEDDVDEVPEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGLGSDFRF
PQTGTTAGGAAPDPFASAPAAADDDDLYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccgagctcatctgccccaaatcctgacccgaaaactaagaaggatttttcc
actgcaattttggagcgaaagaagtctcctaatcgacttgtggttgatgaagctatcaat
gatgataattctgtggtgtccttgcaccctgctaccatggaaaaacttcagttttttcgg
ggtgacactgtgctaataaaggggaagaaacgaaaagacacagtttgcattgttcttgct
gatgaacaatgtgaagaaccgaaaatcagaatgaacaaagttgtaagggctaatcttagg
gttcgtcttggagatgttgtgtcggttcatacttgccctgatgtcaaatatgggaagcgg
gttcacatccttccaatcgatgatacaattgaaggtgtaaccggaaacttgtttgatgca
tatttgaagccatacttcttggaatcttaccggcctgtgaggaagggtgaccttttcctg
gtcaggggtgggatgcgaagtgttgagttcaaggtcattgagacagaccctggtgaatac
tgtgttgttgctcctgatactgagattttctgtgagggagaacctgtgaaacgtgaggat
gaggaaaaattgaatgaggtgggctatgatgatgttggaggtgttaggaagcaaatggct
cagatacgcgagttagtagagttacctcttagacacccacagctcttcaagtccattgga
gtgaaaccaccgaaaggtattctgctttatggaccacctgggtcggggaaaactttgatt
gcaagggctgtagctaatgagactggagcattcttctttttgattaatgggcctgaaata
atgtcaaagttagctggtgagagtgaaagcaacttgaggaaggcatttgaagaagctgaa
aagaatgccccatcaatcatttttattgatgagttagattccattgctccaaagagggag
aagactcagggtgaagtggaaaggcgtatagtatcgcaacttctgactttgatggatggt
ctcaagtcccgtgcacatgttattgtcatgggagctacaaataggccaaacagcattgac
cctgctctgaggaggtttggaagatttgatagagagattgacataggtgtaccggatgaa
gttggaagattggaagttttgagaatccatacaaagaacatgaaacttgcagaagatgtt
gatctcgaacgagtttcaaaggatacccatggttatgtcggtgctgatcttgccgctctc
tgtactgaggctgctcttcaatgcatccgtgagaaaatggatgttattgacttggaagat
gaggaaattgatgctgaggtgttgaattctatggctgtgacgaatgaacacttccagact
gcattgggtgcttcaaatccttcagcattgcgtgaaactgttgtggaggtacctaatgtc
tcatgggacgctattggtggattggacaatgtcaaaagagaacttcaagagactgttcaa
tacccagtggagcatcctgagaagtttgagaaatttggcatgtcaccttctaaaggtgtt
ctcttttatgggccacctggctgtggtaaaacccttcttgctaaggcaattgccaatgaa
tgccaggcgaatttcattagcatcaaaggccccgagttactgacaatgtggtttggagaa
agtgaggcaaacgtccgtgagatatttgacaaggctcgccaatctgctccttgtgttctt
ttctttgatgagctggactcgattgcaactcagcgtggaaattcttctggagatgctggt
ggtgctgcagatagagtcttgaaccaacttctaactgaaatggatggaatgagtgcaaag
aaaacagtttttatcattggagcaacaaacaggccagacattattgacccagcattgctc
aggcctggacgtcttgaccagctcatctatatcccactcccagatgaagcttcccgtctt
cagattttcaaagcatgtttgcggaagtcacccgtctctaaggatgttgaccttgcagtt
cttgcgcatcatacccatggttttagtggtgctgatatcactgagatatgtcagcgtgcc
tgcaaatatgccatcagagaaaatattgagaaggatattgagaaggagagaagaagggca
gagaacccagaagcgatggaggaggatgacgttgatgaggttcccgagataaaggcagca
cacttcgaggaatccatgaaatttgcccgccgaagtgttagtgatgctgacatcaggaag
taccaggcattcgctcagactctgcagcaatctcgtgggcttggttccgacttccggttc
ccccaaacgggcaccactgcaggaggagcagctccggacccttttgcttcggccccagct
gctgcagatgacgatgatctgtacagctga
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