Rosa chinensis (China rose): 112176605
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Entry
112176605 CDS
T06020
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rcn03110
]
112176605
Chaperones and folding catalysts [BR:
rcn03110
]
Heat shock proteins
HSP100
112176605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_22
Clp_N
AAA_16
Sigma54_activat
AAA_18
nSTAND3
AAA_7
AAA_14
bpMoxR
IstB_IS21
AAA_28
NACHT
DUF87
Zeta_toxin
RNA_helicase
TsaE
ATPase_2
RuvB_N
NBD_SMAX1
AAA_3
AAA_25
ABC_tran
Mg_chelatase
T2SSE
DUF815
ResIII
AAA_19
DNA_pol3_delta2
Torsin
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
112176605
NCBI-ProteinID:
XP_024170384
LinkDB
All DBs
Position
7:3944656..3948469
Genome browser
AA seq
883 aa
AA seq
DB search
MNPDKFTHKTNESLDGAHELASDAGHVHFTPLHLATALVSDPAGIFRQAIANASGSEEGP
KSVERVFNQALKKVPSQSPPPDQVPASTTLIKAIRRAQSAQKDRGDTHLAVDQLILGLLE
DSQIGDLLKEAGIATAKVKSEVQKLRGKEGKKVESASGDTNFQALTTYGRDLVEQAEKID
PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIARGDVPSNLADVRLI
ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVNLFIDEIHLVLGAGRTEGSMDAANL
FKPMLARGTLRCIGATTLEEYRKYVEKDAAFERRFLQVHVAEPSVPDTASILRGLKEKYE
GYHKVRILDTAFVVAAQLSNQYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
RMQLEVERHALEKEEDKANEARLLEVRRELDDLRDKLQPLMKKYRKEKEIRRLKKEIRRL
KEKRKDLLIDLTEVERRCDLARAADLRYGAIQEVESAIAQLEGSTEENLMLTETVGPEHI
AEVVSRWTGIPVTRLAQDDKERLIGLGERLHKRVVGQNQAVDAVAEAVLRSRAGLGRPQQ
PTGSFLFLGPTGVGKTELAKALAEQLFDDENLIVRIDMSEYMEQHSVARLIGAPPGYVGH
EDGGQLTEAVRRRPYSVILFDEVEKAHPPVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM
TSNLGAEHLLTVSLGKCSMQDAHDPVMQEVRKYFRPELLNRLDEVVFFDPLSPEQLRKVA
RLRMDDVDARLAKRGVAFAVTDEALDYIVHESSDPVYGARPIRRWLEKRVVTELSRMLIR
EEIDENSTVYIDAGPMANELVYRVEKNRGLVNAVTGQNSDVLI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgacaaatttactcacaagacaaatgagtctctggatggggctcatgaactg
gcatcggatgctggccatgtgcacttcacgccgctccatcttgcaaccgcattggtttcg
gaccctgctggcatttttcgacaggcgattgccaatgctagtggcagtgaagagggtccg
aagtcggtggagagagttttcaatcaggcattgaagaaggttccgtctcagtcccctccc
ccggatcaagtaccggccagcactactctcattaaggcaattcggagagcgcagtcggcg
cagaaagatcgaggggatacacatttggctgttgatcagttgattcttggcctactggag
gattcgcagattggggacttgctcaaagaagctggcattgctacagcgaaggtgaaatcg
gaagttcaaaagcttcgtggtaaagaggggaagaaggtggagagtgcctctggggacacg
aatttccaagctttgactacttatgggagagaccttgttgagcaggccgagaagattgac
ccagtgattggtagagatgaggagataaggagggtggttcggattctctcaaggagaacg
aagaataacccggtgctaattggagagccaggagttgggaaaacagcagtagttgaaggt
ttggctcagaggatagcaagaggggatgttcctagtaatctggcagatgtgaggcttatc
gcattggacatgggtgctctagtagctggtgccaagtatagaggagaatttgaggagagg
ttgaaggctgtcttgaaagaagtagaagaggccgaagggaaggtgaatctgtttattgat
gaaatccaccttgttcttggtgctggtagaacagaggggtctatggatgccgccaacctt
ttcaagccaatgcttgctagaggtacactccggtgcattggggcaacgactcttgaagag
tacaggaaatatgtggagaaggatgctgcatttgagcgaaggtttctacaagttcatgtg
gcggaacctagtgtgccagacactgctagcatccttcgaggcttgaaggagaaatatgaa
gggtatcataaagttagaattttggatacagcttttgttgttgctgcacaactatcgaat
caatatatcacagggcgccatctccctgacaaggcaattgatctagttgatgaagcttgt
gcaaatgtgagagtccagcttgacagtcaaccagaagaaattgacaaccttgagagaaag
aggatgcagctggaagttgagcgtcatgcgcttgaaaaagaagaggataaagctaacgaa
gctcgtcttcttgaagttcggagggagcttgatgacttaagagacaagcttcagcccttg
atgaagaaatatagaaaagagaaggaaattcgaaggcttaagaaggaaattcgaaggctt
aaggaaaagcgtaaagatctcttaattgatttgacagaggttgaaagaagatgtgatcta
gccagggcggctgatttgcgttatggggctattcaggaagtggagtctgctattgcccag
cttgaaggaagcacagaagagaacttgatgttgactgagactgttggaccagaacatatt
gcagaggttgtaagccgttggaccggcataccagtaacaaggctcgcccaggatgacaaa
gagaggttaattggacttggtgagagattgcataagagagtagtgggccaaaaccaggca
gttgatgctgttgcagaagccgtattgagatcaagagctgggttaggcagaccacaacaa
ccaactggatcattccttttcttgggtccaactggtgttggtaaaactgagcttgcaaag
gctcttgctgaacaactttttgatgacgaaaatctaattgttcgaattgatatgtctgag
tatatggagcaacattctgttgcacgtctgattggtgctcctcctggatatgttggtcat
gaagacggtggacaactcacagaggcagtgaggcggaggccttatagtgttatactgttt
gatgaagtggagaaagcacaccctccagttttcaatactctcctgcaagttttagatgat
gggaggttaactgatggtcaaggtcgtacagttgattttaggaatacagtgatcattatg
acttcaaaccttggggcggaacatctcctaactgtttcgttgggcaagtgttcaatgcaa
gatgctcatgatccagttatgcaagaggtgagaaaatactttaggcctgaattgctaaat
cggttagatgaggtagtttttttcgatcctctttcacctgagcaactgaggaaggtggct
aggttacgaatggatgacgttgatgcccggcttgctaagaggggtgttgcttttgcggtg
actgatgaagcattagattatattgtgcacgagagttctgatccggtttatggtgctcga
cctataagaagatggcttgagaagagagtggtgacagagctatcaagaatgctgattaga
gaagagatagatgagaactcaactgtgtacatagatgcaggacctatggcaaatgagttg
gtttaccgggttgagaagaatagagggcttgttaatgctgtcaccggtcagaactcagat
gtgttgatataa
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integrated database retrieval system
